RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PPIFP30405 207 aaKnown RBP10.73□□□□□ -0.69
SNCA-204ENST00000394989 BLCAPP62952 87 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNCA-204ENST00000394989 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
SNCA-204ENST00000394989 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
SNCA-204ENST00000394989 IGHG2P01859 326 aa10.72□□□□□ -0.69
SNCA-204ENST00000394989 TRGV3P03979 118 aa10.72□□□□□ -0.69
SNCA-204ENST00000394989 RAB9AP51151 201 aa10.72□□□□□ -0.69
SNCA-204ENST00000394989 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
SNCA-204ENST00000394989 U3KQE9 123 aa10.72□□□□□ -0.69
SNCA-204ENST00000394989 FAM162BQ5T6X4 162 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 OR1N2Q8NGR9 330 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 ZNF469Q96JG9 3925 aaPredicted RBP10.71□□□□□ -0.69
SNCA-204ENST00000394989 MXRA5Q9NR99 2828 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 FAM208BQ5VWN6 2430 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 NBPF19A0A087WUL8 3843 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 TMSB15BA0A087X1C1 80 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 B4DSR2 109 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 RPL24P83731 157 aaKnown RBP10.71□□□□□ -0.69
SNCA-204ENST00000394989 ERCC8Q13216 396 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 C12orf54Q6X4T0 127 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 PSMG3-AS1Q96PY0 264 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 TMEM191AQ9H0A3 160 aa10.71□□□□□ -0.69
SNCA-204ENST00000394989 USP9YO00507 2555 aaPredicted RBP10.71□□□□□ -0.7
SNCA-204ENST00000394989 TRAV8-2A0A0B4J237 113 aa10.71□□□□□ -0.7
SNCA-204ENST00000394989 GATD1Q8NB37 220 aa10.71□□□□□ -0.7
SNCA-204ENST00000394989 NDFIP1Q9BT67 221 aa10.71□□□□□ -0.7
SNCA-204ENST00000394989 A0A096LNT2 108 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 PRSS57Q6UWY2 283 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 METTL26Q96S19 204 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 LOC389332A0A1B0GUA5 103 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 UNQ9165/PRO28630Q6UXU0 137 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 WFDC3Q8IUB2 231 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 FER1L6-AS1Q8NA97 138 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 OR8A1Q8NGG7 326 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 ATP6V0BQ99437 205 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 KLK15Q9H2R5 256 aa10.7□□□□□ -0.7
SNCA-204ENST00000394989 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 PEF1Q9UBV8 284 aaKnown RBP10.69□□□□□ -0.7
SNCA-204ENST00000394989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
SNCA-204ENST00000394989 K7EMI3 77 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 ARL3P36405 182 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 RIGQ13278 110 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 Q6AWC8 147 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 ZNF843Q8N446 348 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 ST20Q9HBF5 79 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 CSPG4Q6UVK1 2322 aa10.69□□□□□ -0.7
SNCA-204ENST00000394989 LCNL1Q6ZST4 164 aa10.68□□□□□ -0.7
SNCA-204ENST00000394989 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
SNCA-204ENST00000394989 SLC50A1Q9BRV3 221 aa10.68□□□□□ -0.7
SNCA-204ENST00000394989 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
SNCA-204ENST00000394989 NCR2O95944 276 aa10.68□□□□□ -0.7
SNCA-204ENST00000394989 DSCR9P59020 149 aa10.68□□□□□ -0.7
SNCA-204ENST00000394989 TMEM213A2RRL7 107 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 MAPK1IP1LQ8NDC0 245 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 A1L4Q6 167 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 BRI3O95415 125 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 ZNF493Q6ZR52 646 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 IL17RELQ6ZVW7 336 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 JMJD8Q96S16 334 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 SMAD7O15105 426 aaKnown RBP10.67□□□□□ -0.7
SNCA-204ENST00000394989 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 GLMPQ8WWB7 406 aa10.67□□□□□ -0.7
SNCA-204ENST00000394989 CD5LO43866 347 aa10.66□□□□□ -0.7
SNCA-204ENST00000394989 SLC25A16P16260 332 aa10.66□□□□□ -0.7
SNCA-204ENST00000394989 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
SNCA-204ENST00000394989 SCRT2Q9NQ03 307 aa10.66□□□□□ -0.7
SNCA-204ENST00000394989 A0A1B0GW15 77 aa10.66□□□□□ -0.7
SNCA-204ENST00000394989 IGLV1-40P01703 118 aa10.66□□□□□ -0.7
SNCA-204ENST00000394989 SMAGPQ0VAQ4 97 aa10.66□□□□□ -0.7
SNCA-204ENST00000394989 IGLC6P0CF74 106 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 GATA3P23771 443 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 CFHR3Q02985 330 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 FAM106AQ4KMX7 169 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 GPHB5Q86YW7 130 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 CHCHD1Q96BP2 118 aaKnown RBP10.65□□□□□ -0.7
SNCA-204ENST00000394989 PTPN13Q12923 2485 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 H3BUA1 57 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 BMI1P35226 326 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 TMEM97Q5BJF2 176 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 ABCA12Q86UK0 2595 aa10.65□□□□□ -0.7
SNCA-204ENST00000394989 NMUP48645 174 aa10.65□□□□□ -0.71
SNCA-204ENST00000394989 HIST1H1AQ02539 215 aaPredicted RBP10.65□□□□□ -0.71
SNCA-204ENST00000394989 TMEM95Q3KNT9 176 aa10.65□□□□□ -0.71
SNCA-204ENST00000394989 LINC01356Q8N9X3 169 aa10.65□□□□□ -0.71
SNCA-204ENST00000394989 USMG5Q96IX5 58 aa10.65□□□□□ -0.71
SNCA-204ENST00000394989 NDUFA4O00483 81 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 IGHV4-59P01825 116 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 PF4V1P10720 104 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 COX6B1P14854 86 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 KRTAP10-9P60411 292 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 DEFB112Q30KQ8 113 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 OR5AL1P0C617 328 aa10.64□□□□□ -0.71
SNCA-204ENST00000394989 FABP5P3A8MUU1 101 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms