RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CRYGDP07320 174 aa14.23□□□□□ -0.13
TRAF4-203ENST00000394925 S100A11P31949 105 aa14.23□□□□□ -0.13
TRAF4-203ENST00000394925 GCSAMLQ5JQS6 135 aa14.23□□□□□ -0.13
TRAF4-203ENST00000394925 MUC21Q5SSG8 566 aa14.23□□□□□ -0.13
TRAF4-203ENST00000394925 GPN1Q9HCN4 374 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-203ENST00000394925 PVALBP20472 110 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-203ENST00000394925 SULT1A1P50225 295 aa14.22□□□□□ -0.13
TRAF4-203ENST00000394925 ZNF138P52744 262 aa14.22□□□□□ -0.13
TRAF4-203ENST00000394925 IQCF2Q8IXL9 164 aa14.22□□□□□ -0.13
TRAF4-203ENST00000394925 Q8TAT8 98 aa14.22□□□□□ -0.13
TRAF4-203ENST00000394925 CHAC2Q8WUX2 184 aa14.22□□□□□ -0.13
TRAF4-203ENST00000394925 SDHCQ99643 169 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-203ENST00000394925 SLC25A2Q9BXI2 301 aa14.22□□□□□ -0.13
TRAF4-203ENST00000394925 IGSF23A1L1A6 192 aa14.21□□□□□ -0.13
TRAF4-203ENST00000394925 PSCAO43653 123 aa14.21□□□□□ -0.13
TRAF4-203ENST00000394925 C10orf126Q8N4M7 172 aa14.21□□□□□ -0.13
TRAF4-203ENST00000394925 OR10G4Q8NGN3 311 aa14.21□□□□□ -0.13
TRAF4-203ENST00000394925 J3QL48 77 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 ORM1P02763 201 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 NBEAP1P0C6P0 100 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 S100A10P60903 97 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 HBG1P69891 147 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 HBG2P69892 147 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 CNPY1Q3B7I2 92 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 STX12Q86Y82 276 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 TMEM252Q8N6L7 170 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 TXNDC17Q9BRA2 123 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 TMEM70Q9BUB7 260 aa14.2□□□□□ -0.14
TRAF4-203ENST00000394925 LYRM2Q9NU23 88 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-203ENST00000394925 LRCOL1A6NCL2 159 aa14.19□□□□□ -0.14
TRAF4-203ENST00000394925 MIR17HGQ75NE6 70 aa14.19□□□□□ -0.14
TRAF4-203ENST00000394925 FAM167A-AS1Q96KT0 104 aa14.19□□□□□ -0.14
TRAF4-203ENST00000394925 C2orf50Q96LR7 162 aa14.19□□□□□ -0.14
TRAF4-203ENST00000394925 ATP6V1FQ16864 119 aa14.18□□□□□ -0.14
TRAF4-203ENST00000394925 TMEM183BQ1AE95 376 aa14.18□□□□□ -0.14
TRAF4-203ENST00000394925 TMEM183AQ8IXX5 376 aa14.18□□□□□ -0.14
TRAF4-203ENST00000394925 RASL10AQ92737 203 aa14.18□□□□□ -0.14
TRAF4-203ENST00000394925 NPCDR1Q9BY65 106 aa14.18□□□□□ -0.14
TRAF4-203ENST00000394925 OR51M1Q9H341 326 aa14.18□□□□□ -0.14
TRAF4-203ENST00000394925 TRBV7-9A0A0J9YWB2 115 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 C9JCJ5 164 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 OR10J4P0C629 311 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 IL7P13232 177 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 ZNF266Q14584 549 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 NTN5Q8WTR8 489 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-203ENST00000394925 SEC22CQ9BRL7 303 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 SPXQ9BT56 116 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 SLC25A31Q9H0C2 315 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 DNAH8Q96JB1 4490 aa14.17□□□□□ -0.14
TRAF4-203ENST00000394925 LOC100131303A0A0U1RQF7 123 aa14.16□□□□□ -0.14
TRAF4-203ENST00000394925 RAB32Q13637 225 aa14.16□□□□□ -0.14
TRAF4-203ENST00000394925 PHYHIPLQ96FC7 376 aa14.16□□□□□ -0.14
TRAF4-203ENST00000394925 TRAV6A0A075B6T7 132 aa14.15□□□□□ -0.14
TRAF4-203ENST00000394925 IGHV3-38A0A0C4DH36 116 aa14.15□□□□□ -0.14
TRAF4-203ENST00000394925 FAM159AQ6UWV7 190 aa14.15□□□□□ -0.14
TRAF4-203ENST00000394925 THAP6Q8TBB0 222 aa14.15□□□□□ -0.14
TRAF4-203ENST00000394925 FXYD5Q96DB9 178 aa14.15□□□□□ -0.14
TRAF4-203ENST00000394925 PAXXQ9BUH6 204 aa14.15□□□□□ -0.14
TRAF4-203ENST00000394925 FAM30AQ9NZY2 134 aa14.15□□□□□ -0.14
TRAF4-203ENST00000394925 TRGV11A0A075B6L2 103 aa14.14□□□□□ -0.15
TRAF4-203ENST00000394925 TRAV4A0A0B4J268 109 aa14.14□□□□□ -0.15
TRAF4-203ENST00000394925 CSN1S1P47710 185 aa14.14□□□□□ -0.15
TRAF4-203ENST00000394925 Q8N814 137 aa14.14□□□□□ -0.15
TRAF4-203ENST00000394925 NHLRC2Q8NBF2 726 aa14.14□□□□□ -0.15
TRAF4-203ENST00000394925 OR4C5Q8NGB2 326 aa14.14□□□□□ -0.15
TRAF4-203ENST00000394925 RBAKDNA6NC62 111 aa14.13□□□□□ -0.15
TRAF4-203ENST00000394925 PLA2G10O15496 165 aa14.13□□□□□ -0.15
TRAF4-203ENST00000394925 TCRBP04435 133 aa14.13□□□□□ -0.15
TRAF4-203ENST00000394925 PPT1P50897 306 aa14.13□□□□□ -0.15
TRAF4-203ENST00000394925 Q6AWC8 147 aa14.13□□□□□ -0.15
TRAF4-203ENST00000394925 RBM38Q9H0Z9 239 aaKnown RBP14.13□□□□□ -0.15
TRAF4-203ENST00000394925 Q9HAA7 133 aa14.13□□□□□ -0.15
TRAF4-203ENST00000394925 NAGKQ9UJ70 344 aa14.13□□□□□ -0.15
TRAF4-203ENST00000394925 RANP62826 216 aaKnown RBP14.12□□□□□ -0.15
TRAF4-203ENST00000394925 IL15RAQ13261 267 aa14.12□□□□□ -0.15
TRAF4-203ENST00000394925 SH2D6Q7Z4S9 175 aa14.12□□□□□ -0.15
TRAF4-203ENST00000394925 IGHV3-16A0A0C4DH30 117 aa14.11□□□□□ -0.15
TRAF4-203ENST00000394925 IBA57-AS1B1ANH7 110 aa14.11□□□□□ -0.15
TRAF4-203ENST00000394925 LYRM1O43325 122 aa14.11□□□□□ -0.15
TRAF4-203ENST00000394925 NHLH2Q02577 135 aa14.11□□□□□ -0.15
TRAF4-203ENST00000394925 LINC01556Q5JQF7 62 aa14.11□□□□□ -0.15
TRAF4-203ENST00000394925 NUDT15Q9NV35 164 aa14.11□□□□□ -0.15
TRAF4-203ENST00000394925 M0R2P5 195 aa14.1□□□□□ -0.15
TRAF4-203ENST00000394925 GNRH2O43555 120 aa14.1□□□□□ -0.15
TRAF4-203ENST00000394925 OR7C2O60412 319 aa14.1□□□□□ -0.15
TRAF4-203ENST00000394925 TIRAPP58753 221 aa14.1□□□□□ -0.15
TRAF4-203ENST00000394925 OR5C1Q8NGR4 320 aa14.1□□□□□ -0.15
TRAF4-203ENST00000394925 LENEPQ9Y5L5 61 aa14.09□□□□□ -0.15
TRAF4-203ENST00000394925 TRAV8-6A0A0B4J262 113 aa14.08□□□□□ -0.16
TRAF4-203ENST00000394925 DIRC3C9JPN6 131 aa14.08□□□□□ -0.16
TRAF4-203ENST00000394925 GATA1P15976 413 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-203ENST00000394925 OR10J3Q5JRS4 329 aa14.08□□□□□ -0.16
TRAF4-203ENST00000394925 IGHV3-30P01768 117 aa14.07□□□□□ -0.16
TRAF4-203ENST00000394925 IGHV3-33P01772 117 aa14.07□□□□□ -0.16
TRAF4-203ENST00000394925 PLA2G1BP04054 148 aaKnown RBP14.07□□□□□ -0.16
TRAF4-203ENST00000394925 IGHV3-30-3P0DP02 117 aa14.07□□□□□ -0.16
TRAF4-203ENST00000394925 IGHV3-30-5P0DP03 117 aa14.07□□□□□ -0.16
TRAF4-203ENST00000394925 TDRG1Q3Y452 100 aa14.07□□□□□ -0.16
TRAF4-203ENST00000394925 C1QBP02746 253 aa14.06□□□□□ -0.16
TRAF4-203ENST00000394925 PFN1P07737 140 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms