RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 GAGE12GP0CL81 117 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 GAGE12IP0CL82 117 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 UBE2L3P68036 154 aaKnown RBP13.53□□□□□ -0.24
UPK3B-203ENST00000394849 RPL7L1Q6DKI1 246 aaKnown RBP13.53□□□□□ -0.24
UPK3B-203ENST00000394849 OR10G4Q8NGN3 311 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 OR10G9Q8NGN4 311 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 OR10G7Q8NGN6 311 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 MRPL53Q96EL3 112 aaKnown RBP13.53□□□□□ -0.24
UPK3B-203ENST00000394849 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 FAT1Q14517 4588 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 PRAC2D3DTV9 90 aa13.52□□□□□ -0.25
UPK3B-203ENST00000394849 FAM229AH3BQW9 127 aa13.52□□□□□ -0.25
UPK3B-203ENST00000394849 M0R3E3 92 aa13.52□□□□□ -0.25
UPK3B-203ENST00000394849 EXOC3-AS1Q8N2X6 119 aa13.52□□□□□ -0.25
UPK3B-203ENST00000394849 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
UPK3B-203ENST00000394849 FXYD5Q96DB9 178 aa13.52□□□□□ -0.25
UPK3B-203ENST00000394849 VPS13BQ7Z7G8 4022 aa13.52□□□□□ -0.25
UPK3B-203ENST00000394849 EIF3GO75821 320 aaKnown RBP eCLIP13.51□□□□□ -0.25
UPK3B-203ENST00000394849 SERF2P84101 59 aa13.51□□□□□ -0.25
UPK3B-203ENST00000394849 ICAM4Q14773 271 aa13.51□□□□□ -0.25
UPK3B-203ENST00000394849 A0A096LPF7 62 aa13.5□□□□□ -0.25
UPK3B-203ENST00000394849 TAAR5O14804 337 aa13.5□□□□□ -0.25
UPK3B-203ENST00000394849 MBP02144 154 aa13.5□□□□□ -0.25
UPK3B-203ENST00000394849 CDC34P49427 236 aaPredicted RBP13.5□□□□□ -0.25
UPK3B-203ENST00000394849 DAZ2Q13117 558 aaKnown RBP13.5□□□□□ -0.25
UPK3B-203ENST00000394849 PHYHIPLQ96FC7 376 aa13.5□□□□□ -0.25
UPK3B-203ENST00000394849 SH3BGRL3Q9H299 93 aa13.5□□□□□ -0.25
UPK3B-203ENST00000394849 PQLC2Q6ZP29 291 aa13.49□□□□□ -0.25
UPK3B-203ENST00000394849 TRAV9-2A0A087WT02 112 aa13.48□□□□□ -0.25
UPK3B-203ENST00000394849 NPIPB6E9PJ23 425 aa13.48□□□□□ -0.25
UPK3B-203ENST00000394849 HMGB3O15347 200 aaKnown RBP13.48□□□□□ -0.25
UPK3B-203ENST00000394849 RANP62826 216 aaKnown RBP13.48□□□□□ -0.25
UPK3B-203ENST00000394849 TMPRSS5Q9H3S3 457 aa13.48□□□□□ -0.25
UPK3B-203ENST00000394849 K7EP13 123 aa13.47□□□□□ -0.25
UPK3B-203ENST00000394849 CSN1S1P47710 185 aa13.47□□□□□ -0.25
UPK3B-203ENST00000394849 KRTAP10-1P60331 282 aa13.47□□□□□ -0.25
UPK3B-203ENST00000394849 VSIG2Q96IQ7 327 aa13.47□□□□□ -0.25
UPK3B-203ENST00000394849 PYGO2Q9BRQ0 406 aa13.47□□□□□ -0.25
UPK3B-203ENST00000394849 A0A087WTM6 91 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 HMSDA8MTL9 139 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 J3QL48 77 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 LEPP41159 167 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 ZNF345Q14585 488 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 GFI1BQ5VTD9 330 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 Q6ZSN1 163 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 KCNRGQ8N5I3 272 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 RAB24Q969Q5 203 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
UPK3B-203ENST00000394849 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.25
UPK3B-203ENST00000394849 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-203ENST00000394849 J3KRW8 73 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 NXPH4O95158 308 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-203ENST00000394849 ARL14EPLP0DKL9 152 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 CT45A10P0DMU9 189 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 GCSHP23434 173 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 FUSP35637 526 aaKnown RBP eCLIP13.45□□□□□ -0.26
UPK3B-203ENST00000394849 ERCC8Q13216 396 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 FAM74A1Q5RGS3 127 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 AKR1C8PQ5T2L2 129 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 Q6ZNX1 250 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 OR11H4Q8NGC9 324 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 LINC00477Q96M19 166 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
UPK3B-203ENST00000394849 A0A0D9SG52 128 aa13.44□□□□□ -0.26
UPK3B-203ENST00000394849 SMR3BP02814 79 aaPredicted RBP13.44□□□□□ -0.26
UPK3B-203ENST00000394849 STAG3L2P0CL84 134 aa13.44□□□□□ -0.26
UPK3B-203ENST00000394849 STAG3L3P0CL85 134 aa13.44□□□□□ -0.26
UPK3B-203ENST00000394849 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
UPK3B-203ENST00000394849 Q6ZTI0 123 aa13.44□□□□□ -0.26
UPK3B-203ENST00000394849 CYTL1Q9NRR1 136 aa13.44□□□□□ -0.26
UPK3B-203ENST00000394849 ICOSQ9Y6W8 199 aa13.44□□□□□ -0.26
UPK3B-203ENST00000394849 KANTRA0A1W2PQU2 76 aa13.43□□□□□ -0.26
UPK3B-203ENST00000394849 ZNF680Q8NEM1 530 aa13.43□□□□□ -0.26
UPK3B-203ENST00000394849 CMTM2Q8TAZ6 248 aa13.43□□□□□ -0.26
UPK3B-203ENST00000394849 HYLS1Q96M11 299 aa13.43□□□□□ -0.26
UPK3B-203ENST00000394849 AGPAT4-IT1Q9H0P7 198 aa13.43□□□□□ -0.26
UPK3B-203ENST00000394849 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
UPK3B-203ENST00000394849 MDFICQ9P1T7 246 aa13.43□□□□□ -0.26
UPK3B-203ENST00000394849 PGPA6NDG6 321 aa13.42□□□□□ -0.26
UPK3B-203ENST00000394849 SLAQ13239 276 aa13.42□□□□□ -0.26
UPK3B-203ENST00000394849 KIR3DS1Q14943 382 aa13.42□□□□□ -0.26
UPK3B-203ENST00000394849 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
UPK3B-203ENST00000394849 IQCF2Q8IXL9 164 aa13.42□□□□□ -0.26
UPK3B-203ENST00000394849 ST6GAL2Q96JF0 529 aa13.42□□□□□ -0.26
UPK3B-203ENST00000394849 RPH3ALQ9UNE2 315 aa13.42□□□□□ -0.26
UPK3B-203ENST00000394849 hCG_2014768A0A024R1R8 64 aa13.41□□□□□ -0.26
UPK3B-203ENST00000394849 PFDN1O60925 122 aa13.41□□□□□ -0.26
UPK3B-203ENST00000394849 ZNF324O75467 553 aaPredicted RBP13.41□□□□□ -0.26
UPK3B-203ENST00000394849 CXorf1O96002 111 aa13.41□□□□□ -0.26
UPK3B-203ENST00000394849 GCHFRP30047 84 aa13.41□□□□□ -0.26
UPK3B-203ENST00000394849 VGLL1Q99990 258 aa13.41□□□□□ -0.26
UPK3B-203ENST00000394849 TMEM70Q9BUB7 260 aa13.41□□□□□ -0.26
UPK3B-203ENST00000394849 ZNF471Q9BX82 626 aaPredicted RBP13.41□□□□□ -0.26
UPK3B-203ENST00000394849 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
UPK3B-203ENST00000394849 CTXND1A0A1B0GTU2 59 aa13.4□□□□□ -0.26
UPK3B-203ENST00000394849 PAX4O43316 350 aa13.4□□□□□ -0.26
UPK3B-203ENST00000394849 BCL2L11O43521 198 aa13.4□□□□□ -0.26
UPK3B-203ENST00000394849 SLC25A5P05141 298 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms