RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SIVA1O15304 175 aa14.17□□□□□ -0.14
PCDHA1-202ENST00000394633 NBPF19A0A087WUL8 3843 aa14.17□□□□□ -0.14
PCDHA1-202ENST00000394633 A6NDN8 102 aa14.17□□□□□ -0.14
PCDHA1-202ENST00000394633 NMUP48645 174 aa14.17□□□□□ -0.14
PCDHA1-202ENST00000394633 DTX2Q86UW9 622 aa14.17□□□□□ -0.14
PCDHA1-202ENST00000394633 Q8N9W7 124 aa14.17□□□□□ -0.14
PCDHA1-202ENST00000394633 OOSP1A8MZH6 123 aa14.16□□□□□ -0.14
PCDHA1-202ENST00000394633 ZFAND3Q9H8U3 227 aa14.16□□□□□ -0.14
PCDHA1-202ENST00000394633 GAGE10A6NGK3 116 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 KIR3DS1Q14943 382 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 LINC01559Q495D7 138 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 UFSP1Q6NVU6 142 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 RNF182Q8N6D2 247 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 OR4X2Q8NGF9 303 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 TNFRSF6BO95407 300 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 PPIFP30405 207 aaKnown RBP14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 LEPP41159 167 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 MINOS1Q5TGZ0 78 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 C1orf122Q6ZSJ8 110 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 ZNF502Q8TBZ5 544 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 MINOS1-NBL1R4GNA1 71 aa14.15□□□□□ -0.14
PCDHA1-202ENST00000394633 MED13LQ71F56 2210 aa14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 GATA1P15976 413 aaPredicted RBP14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 EVI2AP22794 236 aa14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 IL17RELQ6ZVW7 336 aa14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 HELZ2Q9BYK8 2649 aaKnown RBP14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 BUB3O43684 328 aa14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 ZFP36P26651 326 aaKnown RBP14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 FCER1GP30273 86 aa14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 C15orf32Q32M92 178 aa14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 NAA38Q9BRA0 125 aaKnown RBP14.14□□□□□ -0.15
PCDHA1-202ENST00000394633 POLQO75417 2590 aa14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 H3BUT2 72 aa14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 S100A7P31151 101 aa14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 FAM110DQ8TAY7 271 aaPredicted RBP14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 AP1S3Q96PC3 154 aa14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 ODF1Q14990 250 aa14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 VPS25Q9BRG1 176 aa14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 ZMAT4Q9H898 229 aa14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 NXT2Q9NPJ8 142 aaKnown RBP14.13□□□□□ -0.15
PCDHA1-202ENST00000394633 WNK2Q9Y3S1 2297 aa14.12□□□□□ -0.15
PCDHA1-202ENST00000394633 IGHV3-66A0A0C4DH42 116 aa14.12□□□□□ -0.15
PCDHA1-202ENST00000394633 ECSCRQ19T08 205 aa14.12□□□□□ -0.15
PCDHA1-202ENST00000394633 PIFOQ8TCI5 191 aa14.12□□□□□ -0.15
PCDHA1-202ENST00000394633 C11orf21Q9P2W6 132 aa14.12□□□□□ -0.15
PCDHA1-202ENST00000394633 PTPN13Q12923 2485 aa14.12□□□□□ -0.15
PCDHA1-202ENST00000394633 IGKV2D-26A0A0A0MRZ7 120 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 IGKV3D-20A0A0C4DH25 116 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 RBAKDNA6NC62 111 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 CLEC3BP05452 202 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 A0A0G2JLM5 398 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 CLPSL1A2RUU4 121 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 GTF2H5Q6ZYL4 71 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 RAB37Q96AX2 223 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 SIRPDQ9H106 197 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 HHLA3Q9XRX5 114 aa14.11□□□□□ -0.15
PCDHA1-202ENST00000394633 ABCA12Q86UK0 2595 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 AGPAT4-IT1Q9H0P7 198 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 K7EP34 96 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 ATP6V0E1O15342 81 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 TRGV3P03979 118 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 RAB9AP51151 201 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 TMEM158Q8WZ71 300 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 SLC50A1Q9BRV3 221 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 SELENOKQ9Y6D0 94 aa14.1□□□□□ -0.15
PCDHA1-202ENST00000394633 IGLV2-18A0A075B6J9 118 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 IGHV3OR16-13A0A075B7E8 117 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 IGHV3-74A0A0B4J1X5 117 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 KLK9Q2XQG4 91 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 CCDC140Q96MF4 163 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 KLK9Q9UKQ9 250 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 CELSR1Q9NYQ6 3014 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 GOSR1O95249 250 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 PRSS1P07477 247 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 Q8N8P6 123 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 AJUBAQ96IF1 538 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 TTTY13Q9BZ97 58 aa14.09□□□□□ -0.15
PCDHA1-202ENST00000394633 DOPEY2Q9Y3R5 2298 aa14.08□□□□□ -0.16
PCDHA1-202ENST00000394633 TRAV8-2A0A0B4J237 113 aa14.08□□□□□ -0.16
PCDHA1-202ENST00000394633 K7ERU9 68 aa14.08□□□□□ -0.16
PCDHA1-202ENST00000394633 SAP30O75446 220 aa14.08□□□□□ -0.16
PCDHA1-202ENST00000394633 TM4SF20Q53R12 229 aa14.08□□□□□ -0.16
PCDHA1-202ENST00000394633 CLEC19AQ6UXS0 136 aa14.08□□□□□ -0.16
PCDHA1-202ENST00000394633 COTL1Q14019 142 aa14.07□□□□□ -0.16
PCDHA1-202ENST00000394633 FOXC2Q99958 501 aa14.07□□□□□ -0.16
PCDHA1-202ENST00000394633 IGKCP01834 107 aa14.07□□□□□ -0.16
PCDHA1-202ENST00000394633 OR2K2Q8NGT1 345 aa14.07□□□□□ -0.16
PCDHA1-202ENST00000394633 IGHV3-49A0A0A0MS15 119 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 IGHV7-4-1A0A0J9YVY3 117 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 G3V318 75 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 HIGD1BQ9P298 99 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 A0A1W2PPM0 123 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 LINC01548A6NM66 108 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 PSMG4Q5JS54 123 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 SPOCK3Q9BQ16 436 aa14.06□□□□□ -0.16
PCDHA1-202ENST00000394633 ZNF207O43670 478 aaKnown RBP14.05□□□□□ -0.16
PCDHA1-202ENST00000394633 Q6ZQT7 251 aa14.05□□□□□ -0.16
PCDHA1-202ENST00000394633 NRACQ8N912 160 aa14.05□□□□□ -0.16
PCDHA1-202ENST00000394633 ATP5LO75964 103 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms