RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 SPRNQ5BIV9 151 aa11.37□□□□□ -0.59
PPARGC1B-203ENST00000394320 IGLV11-55A0A075B6I3 123 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 NEGR1Q7Z3B1 354 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 LYPD6BQ8NI32 183 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 TSPAN13O95857 204 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 LTAP01374 205 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 IGHV3-64A0A075B6Q5 118 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 PAX4O43316 350 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 IGLV1-47P01700 117 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 HOXD3P31249 432 aaPredicted RBP11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 RNF152Q8N8N0 203 aa11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 PHLDA1Q8WV24 401 aaPredicted RBP11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 SPAG8Q99932 426 aaPredicted RBP11.36□□□□□ -0.59
PPARGC1B-203ENST00000394320 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 TRAV13-1A0A0B4J241 112 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 I3L2K1 104 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 KLK9Q9UKQ9 250 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 PRIMA1Q86XR5 153 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 C10orf126Q8N4M7 172 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
PPARGC1B-203ENST00000394320 RIPPLY3P57055 190 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 MRPL51Q4U2R6 128 aaKnown RBP11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 SAMD5Q5TGI4 173 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 F5H768 121 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 PMVKQ15126 192 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 CCL24O00175 119 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 PSCAO43653 123 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 COL4A3Q01955 1670 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 K7EMI3 77 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 LEPROTO15243 131 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 TMEM243Q9BU79 118 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 CUL9Q8IWT3 2517 aa11.34□□□□□ -0.59
PPARGC1B-203ENST00000394320 GAGE12JA6NER3 117 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 K7EIM0 57 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE1Q13065 139 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE4Q13068 117 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE5Q13069 117 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE13Q4V321 117 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 CST9LQ9H4G1 147 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 KNCNA6PVL3 124 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 FSTL3O95633 263 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 Q8N9W7 124 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 SMIM2Q9BVW6 85 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 TMEM131Q92545 1883 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 hDV102S1A0JD36 115 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 IGHV4-38-2P0DP08 117 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 PRORYQ9H606 182 aa11.33□□□□□ -0.6
PPARGC1B-203ENST00000394320 PLCE1Q9P212 2302 aa11.32□□□□□ -0.6
PPARGC1B-203ENST00000394320 CRYGCP07315 174 aa11.32□□□□□ -0.6
PPARGC1B-203ENST00000394320 OTOGLQ3ZCN5 2332 aa11.32□□□□□ -0.6
PPARGC1B-203ENST00000394320 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
PPARGC1B-203ENST00000394320 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
PPARGC1B-203ENST00000394320 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
PPARGC1B-203ENST00000394320 IGKV1-17P01599 117 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 ESDP10768 282 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 K7EMT4 169 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE12BA1L429 117 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE7O76087 117 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 PRSS57Q6UWY2 283 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 CACNA1AO00555 2505 aa11.31□□□□□ -0.6
PPARGC1B-203ENST00000394320 WIPF2Q8TF74 440 aaPredicted RBP11.3□□□□□ -0.6
PPARGC1B-203ENST00000394320 RMI2Q96E14 147 aa11.3□□□□□ -0.6
PPARGC1B-203ENST00000394320 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
PPARGC1B-203ENST00000394320 C20orf144Q9BQM9 153 aa11.3□□□□□ -0.6
PPARGC1B-203ENST00000394320 TRAV12-2A0A075B6T6 113 aa11.3□□□□□ -0.6
PPARGC1B-203ENST00000394320 ADAMTS9Q9P2N4 1935 aa11.3□□□□□ -0.6
PPARGC1B-203ENST00000394320 TEX48A0A1B0GUV7 120 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 LGALS9BQ3B8N2 356 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 CTSGP08311 255 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 PRR31Q5SQ13 230 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 LINC00574Q9H8X3 128 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 SPG11Q96JI7 2443 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 PRB1P04280 392 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 GP9P14770 177 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 LRRC75A-AS1Q8N1F1 130 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 ZNF48Q96MX3 618 aaPredicted RBP11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 RHOHQ15669 191 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 DYNAPQ8N1N2 210 aa11.29□□□□□ -0.6
PPARGC1B-203ENST00000394320 C16orf54Q6UWD8 224 aa11.28□□□□□ -0.6
PPARGC1B-203ENST00000394320 Q8N7P7 452 aa11.28□□□□□ -0.6
PPARGC1B-203ENST00000394320 TRAV25A0A0B4J276 109 aa11.28□□□□□ -0.6
PPARGC1B-203ENST00000394320 PLA2G5P39877 138 aa11.28□□□□□ -0.6
PPARGC1B-203ENST00000394320 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
PPARGC1B-203ENST00000394320 IGHG2P01859 326 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms