RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 OR2D3Q8NGH3 330 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 SAV1Q9H4B6 383 aaPredicted RBP15.12■□□□□ 0.01
HDDC3-202ENST00000394272 TYMSP04818 313 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 CD33P20138 364 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 TCL1AP56279 114 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 RPL19P84098 196 aaKnown RBP15.12■□□□□ 0.01
HDDC3-202ENST00000394272 NEU1Q99519 415 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 FABP5P3A8MUU1 101 aa15.11■□□□□ 0.01
HDDC3-202ENST00000394272 CRISP2P16562 243 aa15.11■□□□□ 0.01
HDDC3-202ENST00000394272 DEFB131AP59861 70 aa15.11■□□□□ 0.01
HDDC3-202ENST00000394272 PRR9Q5T870 116 aa15.11■□□□□ 0.01
HDDC3-202ENST00000394272 EBLN2Q6P2I7 272 aa15.11■□□□□ 0.01
HDDC3-202ENST00000394272 APRG1Q8IVJ8 170 aa15.11■□□□□ 0.01
HDDC3-202ENST00000394272 BTF3L4Q96K17 158 aa15.11■□□□□ 0.01
HDDC3-202ENST00000394272 GTSF1Q8WW33 167 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 GFRA4Q9GZZ7 299 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 MAP6D1Q9H9H5 199 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 VWFP04275 2813 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 FBN1P35555 2871 aaKnown RBP15.1■□□□□ 0.01
HDDC3-202ENST00000394272 TRRAPQ9Y4A5 3859 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 FAM231BA6NCW3 169 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 RPS10P46783 165 aaKnown RBP15.1■□□□□ 0.01
HDDC3-202ENST00000394272 OR2K2Q8NGT1 345 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 ODF3Q96PU9 254 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 NAT8BQ9UHF3 227 aa15.1■□□□□ 0.01
HDDC3-202ENST00000394272 HIGD1CA8MV81 97 aa15.09■□□□□ 0.01
HDDC3-202ENST00000394272 NUP35Q8NFH5 326 aa15.09■□□□□ 0.01
HDDC3-202ENST00000394272 SRD5A3Q9H8P0 318 aa15.09■□□□□ 0.01
HDDC3-202ENST00000394272 TMEM189A5PLL7 270 aa15.08■□□□□ 0
HDDC3-202ENST00000394272 DUSP14O95147 198 aaKnown RBP15.08■□□□□ 0
HDDC3-202ENST00000394272 GZMBP10144 247 aa15.08■□□□□ 0
HDDC3-202ENST00000394272 FOXA3P55318 350 aaPredicted RBP15.08■□□□□ 0
HDDC3-202ENST00000394272 ZNF575Q86XF7 245 aa15.08■□□□□ 0
HDDC3-202ENST00000394272 KLLNB2CW77 178 aa15.07■□□□□ 0
HDDC3-202ENST00000394272 ODF3L2Q3SX64 289 aa15.07■□□□□ 0
HDDC3-202ENST00000394272 LINC01559Q495D7 138 aa15.07■□□□□ 0
HDDC3-202ENST00000394272 SPATA3Q8NHX4 192 aa15.07■□□□□ 0
HDDC3-202ENST00000394272 A8MTW9 85 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 HLA-DRB4P13762 266 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 KIR3DS1Q14943 382 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 C11orf21Q9P2W6 132 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 HLA-DRB4X5D2U9 266 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 KNCNA6PVL3 124 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 J3KRW8 73 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 GPX1P07203 203 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 ZNF124Q15973 351 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 Q6ZQT7 251 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 ZNF747Q9BV97 191 aa15.06■□□□□ 0
HDDC3-202ENST00000394272 IGKV3D-20A0A0C4DH25 116 aa15.05■□□□□ -0
HDDC3-202ENST00000394272 SPINK4O60575 86 aa15.05■□□□□ -0
HDDC3-202ENST00000394272 ACTL10Q5JWF8 245 aa15.05■□□□□ -0
HDDC3-202ENST00000394272 Q6AWC8 147 aa15.05■□□□□ -0
HDDC3-202ENST00000394272 AMTNQ6UX39 209 aa15.05■□□□□ -0
HDDC3-202ENST00000394272 TMSB15BA0A087X1C1 80 aa15.04■□□□□ -0
HDDC3-202ENST00000394272 LOC105371267A0A1B0GV96 52 aa15.04■□□□□ -0
HDDC3-202ENST00000394272 XKRY2A2RUG3 117 aa15.04■□□□□ -0
HDDC3-202ENST00000394272 H3BMM0 161 aa15.04■□□□□ -0
HDDC3-202ENST00000394272 ORM1P02763 201 aa15.04■□□□□ -0
HDDC3-202ENST00000394272 FRMD6-AS1P0C7T7 363 aa15.04■□□□□ -0
HDDC3-202ENST00000394272 RPS20P60866 119 aaKnown RBP15.04■□□□□ -0
HDDC3-202ENST00000394272 NOTCH3Q9UM47 2321 aa15.04■□□□□ -0
HDDC3-202ENST00000394272 TRAV21A0A0B4J279 112 aa15.03■□□□□ -0
HDDC3-202ENST00000394272 IGKV3-20P01619 116 aa15.03■□□□□ -0
HDDC3-202ENST00000394272 PHOX2AO14813 284 aa15.03■□□□□ -0
HDDC3-202ENST00000394272 TRGC2P03986 189 aa15.03■□□□□ -0
HDDC3-202ENST00000394272 LEPP41159 167 aa15.03■□□□□ -0
HDDC3-202ENST00000394272 BEAN1Q3B7T3 259 aa15.03■□□□□ -0
HDDC3-202ENST00000394272 MRPL54Q6P161 138 aaKnown RBP15.03■□□□□ -0
HDDC3-202ENST00000394272 PGLYRP4Q96LB8 373 aa15.03■□□□□ -0
HDDC3-202ENST00000394272 C1orf196B1AJZ1 125 aa15.02■□□□□ -0
HDDC3-202ENST00000394272 RNASE4P34096 147 aaKnown RBP15.02■□□□□ -0
HDDC3-202ENST00000394272 INSL3P51460 131 aa15.02■□□□□ -0
HDDC3-202ENST00000394272 CDKN1BP46527 198 aa15.01□□□□□ -0.01
HDDC3-202ENST00000394272 ATP5L2Q7Z4Y8 100 aa15.01□□□□□ -0.01
HDDC3-202ENST00000394272 OR11H12B2RN74 326 aa15.01□□□□□ -0.01
HDDC3-202ENST00000394272 FAM110AQ9BQ89 295 aa15.01□□□□□ -0.01
HDDC3-202ENST00000394272 A0A1B0GXF2 115 aa15□□□□□ -0.01
HDDC3-202ENST00000394272 RBMY1BA6NDE4 496 aaKnown RBP15□□□□□ -0.01
HDDC3-202ENST00000394272 RBMY1EA6NEQ0 496 aaKnown RBP15□□□□□ -0.01
HDDC3-202ENST00000394272 M0R2Z0 102 aa15□□□□□ -0.01
HDDC3-202ENST00000394272 RBMY1DP0C7P1 496 aaKnown RBP15□□□□□ -0.01
HDDC3-202ENST00000394272 IGLC6P0CF74 106 aa15□□□□□ -0.01
HDDC3-202ENST00000394272 TSPOP30536 169 aa15□□□□□ -0.01
HDDC3-202ENST00000394272 C9orf66Q5T8R8 295 aa15□□□□□ -0.01
HDDC3-202ENST00000394272 RASL11AQ6T310 242 aa15□□□□□ -0.01
HDDC3-202ENST00000394272 CMC4P56277 68 aaPredicted RBP14.99□□□□□ -0.01
HDDC3-202ENST00000394272 RAB5BP61020 215 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 SPINK13Q1W4C9 94 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 GFI1BQ5VTD9 330 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 WFDC9Q8NEX5 89 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 GNB1LQ9BYB4 327 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 C7orf71A4D174 169 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 COX19Q49B96 90 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 ZFP82Q8N141 532 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 CLUHP3Q96NS8 147 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 C19orf73Q9NVV2 129 aa14.99□□□□□ -0.01
HDDC3-202ENST00000394272 STAB1Q9NY15 2570 aa14.98□□□□□ -0.01
HDDC3-202ENST00000394272 GRIFINA4D1Z8 144 aa14.98□□□□□ -0.01
HDDC3-202ENST00000394272 ZNF324O75467 553 aaPredicted RBP14.98□□□□□ -0.01
HDDC3-202ENST00000394272 CD7P09564 240 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms