RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 KIR3DS1Q14943 382 aa17.22■□□□□ 0.35
CNN3-202ENST00000394202 ELOBQ15370 118 aa17.22■□□□□ 0.35
CNN3-202ENST00000394202 PPP1R14DQ9NXH3 145 aa17.22■□□□□ 0.35
CNN3-202ENST00000394202 FBLL1A6NHQ2 334 aaKnown RBP17.22■□□□□ 0.35
CNN3-202ENST00000394202 ZNF80P51504 273 aaPredicted RBP17.22■□□□□ 0.35
CNN3-202ENST00000394202 FAM19A4Q96LR4 140 aa17.22■□□□□ 0.35
CNN3-202ENST00000394202 RNASE7Q9H1E1 156 aaKnown RBP17.22■□□□□ 0.35
CNN3-202ENST00000394202 H3BMM0 161 aa17.21■□□□□ 0.35
CNN3-202ENST00000394202 RIPPLY3P57055 190 aa17.21■□□□□ 0.35
CNN3-202ENST00000394202 FABP9Q0Z7S8 132 aa17.21■□□□□ 0.35
CNN3-202ENST00000394202 PRR31Q5SQ13 230 aa17.21■□□□□ 0.35
CNN3-202ENST00000394202 SAPCD1Q5SSQ6 148 aa17.21■□□□□ 0.35
CNN3-202ENST00000394202 PCP4L1A6NKN8 68 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 J3KRW8 73 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 SMIM6P0DI80 62 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 HLA-DRB4P13762 266 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 PRR9Q5T870 116 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 Q6ZQT7 251 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 SMIM12Q96EX1 92 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 HLA-DRB4X5D2U9 266 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 RPS10P46783 165 aaKnown RBP17.2■□□□□ 0.34
CNN3-202ENST00000394202 ZFAND2AQ8N6M9 145 aa17.2■□□□□ 0.34
CNN3-202ENST00000394202 RBMY1BA6NDE4 496 aaKnown RBP17.19■□□□□ 0.34
CNN3-202ENST00000394202 RBMY1EA6NEQ0 496 aaKnown RBP17.19■□□□□ 0.34
CNN3-202ENST00000394202 RBMY1DP0C7P1 496 aaKnown RBP17.19■□□□□ 0.34
CNN3-202ENST00000394202 S100A12P80511 92 aa17.19■□□□□ 0.34
CNN3-202ENST00000394202 AMTNQ6UX39 209 aa17.19■□□□□ 0.34
CNN3-202ENST00000394202 SFRP2Q96HF1 295 aa17.19■□□□□ 0.34
CNN3-202ENST00000394202 COX8CQ7Z4L0 72 aa17.19■□□□□ 0.34
CNN3-202ENST00000394202 NDFIP1Q9BT67 221 aa17.19■□□□□ 0.34
CNN3-202ENST00000394202 ERVFC1-1P60608 527 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 FAM110AQ9BQ89 295 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 CTDSP1Q9GZU7 261 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 LENEPQ9Y5L5 61 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 M0R2Z0 102 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 DUSP14O95147 198 aaKnown RBP17.17■□□□□ 0.34
CNN3-202ENST00000394202 CXCL1P09341 107 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 NUDT10Q8NFP7 164 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 NUDT11Q96G61 164 aa17.17■□□□□ 0.34
CNN3-202ENST00000394202 C19orf71A6NCJ1 209 aa17.16■□□□□ 0.34
CNN3-202ENST00000394202 FXYD7P58549 80 aa17.16■□□□□ 0.34
CNN3-202ENST00000394202 DEFB125Q8N687 156 aa17.16■□□□□ 0.34
CNN3-202ENST00000394202 A8MTW9 85 aa17.15■□□□□ 0.34
CNN3-202ENST00000394202 KRTAP10-11P60412 298 aa17.15■□□□□ 0.34
CNN3-202ENST00000394202 NOTCH1P46531 2555 aa17.15■□□□□ 0.34
CNN3-202ENST00000394202 MGAM2Q2M2H8 2515 aa17.15■□□□□ 0.34
CNN3-202ENST00000394202 CRISP2P16562 243 aa17.15■□□□□ 0.34
CNN3-202ENST00000394202 CMC4P56277 68 aaPredicted RBP17.15■□□□□ 0.34
CNN3-202ENST00000394202 SPINK13Q1W4C9 94 aa17.15■□□□□ 0.34
CNN3-202ENST00000394202 IBA57Q5T440 356 aaKnown RBP17.15■□□□□ 0.34
CNN3-202ENST00000394202 URGCP-MRPS24S4R325 110 aa17.15■□□□□ 0.34
CNN3-202ENST00000394202 G3V4G9 280 aa17.14■□□□□ 0.33
CNN3-202ENST00000394202 SH2D1AO60880 128 aa17.14■□□□□ 0.33
CNN3-202ENST00000394202 GTSCR1Q86UQ5 136 aa17.14■□□□□ 0.33
CNN3-202ENST00000394202 Q8N1Y9 231 aa17.14■□□□□ 0.33
CNN3-202ENST00000394202 NBEAL1Q6ZS30 2694 aa17.14■□□□□ 0.33
CNN3-202ENST00000394202 TRAV12-2A0A075B6T6 113 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 TGIF2-C20orf24A0A0A6YYL0 155 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 GPX1P07203 203 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 RNASE4P34096 147 aaKnown RBP17.13■□□□□ 0.33
CNN3-202ENST00000394202 STHQ8IWL8 128 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 OR10G8Q8NGN5 311 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 KLLNB2CW77 178 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 CA1P00915 261 aaPredicted RBP17.13■□□□□ 0.33
CNN3-202ENST00000394202 FAM162BQ5T6X4 162 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 ODF3Q96PU9 254 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 OSTCQ9NRP0 149 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 V9GYV3 84 aa17.13■□□□□ 0.33
CNN3-202ENST00000394202 HOXA5P20719 270 aa17.12■□□□□ 0.33
CNN3-202ENST00000394202 FAM231DQ6ZW35 169 aa17.12■□□□□ 0.33
CNN3-202ENST00000394202 TRPT1Q86TN4 253 aaKnown RBP17.12■□□□□ 0.33
CNN3-202ENST00000394202 C11orf21Q9P2W6 132 aa17.12■□□□□ 0.33
CNN3-202ENST00000394202 TRBV7-9A0A0J9YWB2 115 aa17.11■□□□□ 0.33
CNN3-202ENST00000394202 RPL19P84098 196 aaKnown RBP17.11■□□□□ 0.33
CNN3-202ENST00000394202 FAM210BQ96KR6 192 aa17.11■□□□□ 0.33
CNN3-202ENST00000394202 TRBV24-1A0A075B6N3 115 aa17.11■□□□□ 0.33
CNN3-202ENST00000394202 PFN1P07737 140 aaKnown RBP17.1■□□□□ 0.33
CNN3-202ENST00000394202 CDKN1BP46527 198 aa17.1■□□□□ 0.33
CNN3-202ENST00000394202 EGFEM1PQ0D2K5 195 aa17.1■□□□□ 0.33
CNN3-202ENST00000394202 DAZAP1Q96EP5 407 aaKnown RBP17.1■□□□□ 0.33
CNN3-202ENST00000394202 ZNF705GA8MUZ8 300 aaPredicted RBP17.09■□□□□ 0.33
CNN3-202ENST00000394202 P01737 135 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 LEPP41159 167 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 GFI1BQ5VTD9 330 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 ZNF575Q86XF7 245 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 ANAPC16Q96DE5 110 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 DNAH3Q8TD57 4116 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 FABP5P3A8MUU1 101 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 H7BYZ3 331 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 CRXO43186 299 aaPredicted RBP17.09■□□□□ 0.33
CNN3-202ENST00000394202 RPL35AP18077 110 aaKnown RBP17.09■□□□□ 0.33
CNN3-202ENST00000394202 DNHD1Q96M86 4753 aa17.09■□□□□ 0.33
CNN3-202ENST00000394202 TRAV12-3A0A0B4J271 114 aa17.08■□□□□ 0.33
CNN3-202ENST00000394202 CLUHP3Q96NS8 147 aa17.08■□□□□ 0.33
CNN3-202ENST00000394202 GATCO43716 136 aaKnown RBP17.08■□□□□ 0.32
CNN3-202ENST00000394202 SAMD5Q5TGI4 173 aa17.08■□□□□ 0.32
CNN3-202ENST00000394202 TSPOP30536 169 aa17.07■□□□□ 0.32
CNN3-202ENST00000394202 Q6AWC8 147 aa17.07■□□□□ 0.32
CNN3-202ENST00000394202 RPP21Q9H633 154 aaKnown RBP17.07■□□□□ 0.32
CNN3-202ENST00000394202 TMSB15BA0A087X1C1 80 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms