RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 ZNF562Q6V9R5 426 aa9.21□□□□□ -0.93
R3HDM2-203ENST00000393811 BOD1L1Q8NFC6 3051 aa9.21□□□□□ -0.93
R3HDM2-203ENST00000393811 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.93
R3HDM2-203ENST00000393811 ATRXP46100 2492 aa9.21□□□□□ -0.93
R3HDM2-203ENST00000393811 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.21□□□□□ -0.932e-7■■□□□ 11.4
R3HDM2-203ENST00000393811 F5H697 171 aa9.21□□□□□ -0.94
R3HDM2-203ENST00000393811 SPRY2O43597 315 aa9.21□□□□□ -0.94
R3HDM2-203ENST00000393811 METTL26Q96S19 204 aa9.21□□□□□ -0.94
R3HDM2-203ENST00000393811 LOC400499M0QZD8 3231 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 PRAC2D3DTV9 90 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 PSMB2P49721 201 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 SRSF8Q9BRL6 282 aaKnown RBP9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 PHLDA3Q9Y5J5 127 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 CLEC2AQ6UVW9 174 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 Q8N8P6 123 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 CFHR4Q92496 578 aa9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
R3HDM2-203ENST00000393811 WI2-2373I1.2A0A1W2PRP0 233 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 HOXA3O43365 443 aaPredicted RBP9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 TRGV3P03979 118 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 C12orf74Q32Q52 190 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 IGLL5B9A064 214 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 NDPQ00604 133 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 TMEM190Q8WZ59 177 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 AGRNO00468 2067 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 TMEM238LA0A1B0GVL6 79 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 A6NJY4 79 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 CD300EQ496F6 205 aaPredicted RBP9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
R3HDM2-203ENST00000393811 MGAQ8IWI9 3026 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 ZNF815PA8K554 130 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 PIP4P2Q8N4L2 257 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 U3KQK5 164 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 SHISA9B4DS77 424 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 H7C2G1 150 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 C16orf54Q6UWD8 224 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 IGFL3Q6UXB1 125 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 FANCD2OSQ96PS1 177 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 EMP1P54849 157 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 PRR30Q53SZ7 412 aaPredicted RBP9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
R3HDM2-203ENST00000393811 F8W1H4 67 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 PLNP26678 52 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 RAB9AP51151 201 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 GLMPQ8WWB7 406 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 WFDC12Q8WWY7 111 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 SLC50A1Q9BRV3 221 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 IGLV11-55A0A075B6I3 123 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 H7C1H1 209 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 NDUFS8O00217 210 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 FOXI2Q6ZQN5 318 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 DMDP11532 3685 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 Q1RN00 199 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 VMO1Q7Z5L0 202 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 C14orf178Q8N769 122 aaPredicted RBP9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 HIGD1BQ9P298 99 aa9.17□□□□□ -0.94
R3HDM2-203ENST00000393811 CTSGP08311 255 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 IGLC6P0CF74 106 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 AGPAT4-IT1Q9H0P7 198 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 HERVK_113P61574 105 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 CKS1BP61024 79 aa9.16□□□□□ -0.94
R3HDM2-203ENST00000393811 TMEM170BQ5T4T1 132 aa9.15□□□□□ -0.94
R3HDM2-203ENST00000393811 GATD1Q8NB37 220 aa9.15□□□□□ -0.94
R3HDM2-203ENST00000393811 OR10J6PQ8NGY7 276 aa9.15□□□□□ -0.94
R3HDM2-203ENST00000393811 A0A087WX48 190 aa9.15□□□□□ -0.94
R3HDM2-203ENST00000393811 LYRM7Q5U5X0 104 aa9.15□□□□□ -0.94
R3HDM2-203ENST00000393811 LINC01549A6NIU2 74 aa9.15□□□□□ -0.95
R3HDM2-203ENST00000393811 ATP5G2Q06055 141 aa9.15□□□□□ -0.95
R3HDM2-203ENST00000393811 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.95
R3HDM2-203ENST00000393811 F8VRH5 84 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 G3V318 75 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 MRPS12O15235 138 aaKnown RBP9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 IGHV3OR16-10A0A075B7F0 116 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 CCL21O00585 134 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 ANKRD11Q6UB99 2663 aaPredicted RBP9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 MYMXA0A1B0GTQ4 84 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
R3HDM2-203ENST00000393811 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 TNFRSF13BO14836 293 aaPredicted RBP9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 PRTN3P24158 256 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 ASIPP42127 132 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 SPAG8Q99932 426 aaPredicted RBP9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 SLC25A16P16260 332 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 PIP4P1Q86T03 277 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 PRADC1Q9BSG0 188 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 IGKV3D-20A0A0C4DH25 116 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 FAM74A4Q5TZK3 123 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 SMAD5-AS1Q9Y6J3 95 aa9.13□□□□□ -0.95
R3HDM2-203ENST00000393811 SPG11Q96JI7 2443 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms