RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 WIPF1O43516 503 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 EFNA4P52798 201 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 TMEM258P61165 79 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 MDFICQ9P1T7 246 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 RPL35AP18077 110 aaKnown RBP6.06□□□□□ -1.44
VTI1A-201ENST00000393077 FAM53AQ6NSI3 398 aaPredicted RBP6.06□□□□□ -1.44
VTI1A-201ENST00000393077 Q8N8P6 123 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 IGFBPL1Q8WX77 278 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 FXYD5Q96DB9 178 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 LINC00526Q96FQ7 95 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 PEMTQ9UBM1 199 aa6.06□□□□□ -1.44
VTI1A-201ENST00000393077 NCOR2Q9Y618 2525 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 UPK2O00526 184 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 WNT9BO14905 357 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 COX7CP15954 63 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 SMCPP49901 116 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-201ENST00000393077 GFRALQ6UXV0 394 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 IL17RELQ6ZVW7 336 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 C8orf31Q8N9H6 132 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 RASL10AQ92737 203 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 PTPRSQ13332 1948 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 PRSS46E5RG02 174 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 SIGLEC15Q6ZMC9 328 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 ADAMTS9Q9P2N4 1935 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 MBD3L4A6NDZ8 208 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-201ENST00000393077 MBD3L3A6NE82 208 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-201ENST00000393077 MBD3L5A6NJ08 208 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-201ENST00000393077 LGALS9O00182 355 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 Q6P435 159 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 LINC00322Q6ZN03 302 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-201ENST00000393077 RNF125Q96EQ8 232 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 LINC00477Q96M19 166 aa6.05□□□□□ -1.44
VTI1A-201ENST00000393077 FOXG1P55316 489 aaPredicted RBP6.04□□□□□ -1.44
VTI1A-201ENST00000393077 FREM1Q5H8C1 2179 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 UTF1Q5T230 341 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 LINC00643Q86TS7 51 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 DTX1Q86Y01 620 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 C10orf105Q8TEF2 133 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 PRSS22Q9GZN4 317 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 PINLYPA6NC86 204 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 F8WDY8 70 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 MRPS12O15235 138 aaKnown RBP6.04□□□□□ -1.44
VTI1A-201ENST00000393077 PSPNO60542 156 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 IGLV2-14P01704 120 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 RNF152Q8N8N0 203 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 KLHL30-AS1Q8NEE0 82 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 CXXC4Q9H2H0 198 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 IGF2RP11717 2491 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 SH2D1AO60880 128 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 Q0VFX4 171 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 FHL3Q13643 280 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 PRO3102Q9H379 93 aa6.04□□□□□ -1.44
VTI1A-201ENST00000393077 SPG11Q96JI7 2443 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 CNTFRP26992 372 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 PIFOQ8TCI5 191 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 TMEM243Q9BU79 118 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 JPT2Q9H910 190 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 PRRC2CQ9Y520 2896 aaKnown RBP6.03□□□□□ -1.44
VTI1A-201ENST00000393077 TRBV7-3A0A075B6L6 115 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 IGHV3-64A0A075B6Q5 118 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 C19orf71A6NCJ1 209 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 COL8A2P25067 703 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 C4orf26Q17RF5 130 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 Q8N7P7 452 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 WFDC11Q8NEX6 87 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 FAM167A-AS1Q96KT0 104 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 SPRY3O43610 288 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 PFN2P35080 140 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
VTI1A-201ENST00000393077 TMEM190Q8WZ59 177 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 BPTFQ12830 3046 aa6.03□□□□□ -1.44
VTI1A-201ENST00000393077 H3BT86 120 aa6.02□□□□□ -1.45
VTI1A-201ENST00000393077 RNASE2P10153 161 aaKnown RBP6.02□□□□□ -1.45
VTI1A-201ENST00000393077 NCKAP5O14513 1909 aa6.02□□□□□ -1.45
VTI1A-201ENST00000393077 INAFM2P0DMQ5 153 aa6.02□□□□□ -1.45
VTI1A-201ENST00000393077 LINC01587Q99440 93 aa6.02□□□□□ -1.45
VTI1A-201ENST00000393077 TRIOO75962 3097 aa6.02□□□□□ -1.45
VTI1A-201ENST00000393077 SAA1P0DJI8 122 aaPredicted RBP6.02□□□□□ -1.45
VTI1A-201ENST00000393077 RPL27AP46776 148 aaKnown RBP6.02□□□□□ -1.45
VTI1A-201ENST00000393077 RBM3P98179 157 aaKnown RBP6.02□□□□□ -1.45
VTI1A-201ENST00000393077 KIR2DL5BQ8NHK3 375 aa6.02□□□□□ -1.45
VTI1A-201ENST00000393077 ATG2AQ2TAZ0 1938 aa6.02□□□□□ -1.45
VTI1A-201ENST00000393077 TM4SF5O14894 197 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 TFF1P04155 84 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 Q6ZSR3 168 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 PROK2Q9HC23 129 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 HHLA3Q9XRX5 114 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 IGLV3-32A0A0A0MS00 114 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 A0A0B4J2C4 111 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 P0C879 139 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 MALP21145 153 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 Q71RC1 249 aaPredicted RBP6.01□□□□□ -1.45
VTI1A-201ENST00000393077 TMEM14BQ9NUH8 114 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 ACACBO00763 2458 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 MED13Q9UHV7 2174 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 NACAE9PAV3 2078 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 M0R381 172 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms