RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
SHTN1-204ENST00000392903 RNF5Q99942 180 aa11.7□□□□□ -0.54
SHTN1-204ENST00000392903 NCBP2LA6PVI3 153 aaKnown RBP11.69□□□□□ -0.54
SHTN1-204ENST00000392903 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 ZNF502Q8TBZ5 544 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 ZNF479Q96JC4 524 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 RASL11BQ9BPW5 248 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 SHANK2-AS3Q9BTD1 123 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 SMKR1H3BMG3 65 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 IGKCP01834 107 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 ETDBQ3ZM63 59 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
SHTN1-204ENST00000392903 FLNCQ14315 2725 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 M0R1W7 72 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 TAL2Q16559 108 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 DTX2Q86UW9 622 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 ARPC1AQ92747 370 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 ODF3BA8MYP8 253 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 H3BMG7 143 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 K7EIM0 57 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 IGKV1-17P01599 117 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 FCER1GP30273 86 aa11.68□□□□□ -0.54
SHTN1-204ENST00000392903 SPG11Q96JI7 2443 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 NPIPB5A8MRT5 1133 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 H3BRN7 92 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 SH2D1AO60880 128 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 MAP1LC3AQ9H492 121 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 PRO0461Q9UI25 63 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.67□□□□□ -0.54
SHTN1-204ENST00000392903 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 COX8CQ7Z4L0 72 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
SHTN1-204ENST00000392903 DPM2O94777 84 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 LEPP41159 167 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 C12orf74Q32Q52 190 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 NPBQ8NG41 125 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 C19orf84I3L1E1 186 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 M0R3E3 92 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 MRPS12O15235 138 aaKnown RBP11.66□□□□□ -0.54
SHTN1-204ENST00000392903 PRSS1P07477 247 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 GNLYP22749 145 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 TWIST1Q15672 202 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 GTSCR1Q86UQ5 136 aa11.66□□□□□ -0.54
SHTN1-204ENST00000392903 ATP5LO75964 103 aa11.65□□□□□ -0.54
SHTN1-204ENST00000392903 NDUFA3O95167 84 aa11.65□□□□□ -0.54
SHTN1-204ENST00000392903 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
SHTN1-204ENST00000392903 NXT2Q9NPJ8 142 aaKnown RBP11.65□□□□□ -0.54
SHTN1-204ENST00000392903 UTP20O75691 2785 aaKnown RBP11.65□□□□□ -0.55
SHTN1-204ENST00000392903 PRORYQ9H606 182 aa11.65□□□□□ -0.55
SHTN1-204ENST00000392903 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 IGLC6P0CF74 106 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 NDPQ00604 133 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 PDE6HQ13956 83 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 ITLN2Q8WWU7 325 aaPredicted RBP11.64□□□□□ -0.55
SHTN1-204ENST00000392903 RNF185Q96GF1 192 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 AGRNO00468 2067 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 IL4P05112 153 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 RRN3P1Q2M238 152 aa11.64□□□□□ -0.55
SHTN1-204ENST00000392903 TMEM8BA6NDV4 472 aa11.63□□□□□ -0.55
SHTN1-204ENST00000392903 K7EMI3 77 aa11.63□□□□□ -0.55
SHTN1-204ENST00000392903 INSL3P51460 131 aa11.63□□□□□ -0.55
SHTN1-204ENST00000392903 CRYBA4P53673 196 aa11.63□□□□□ -0.55
SHTN1-204ENST00000392903 ATP5G2Q06055 141 aa11.63□□□□□ -0.55
SHTN1-204ENST00000392903 FOXC2Q99958 501 aa11.63□□□□□ -0.55
SHTN1-204ENST00000392903 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
SHTN1-204ENST00000392903 MRPL16Q9NX20 251 aaKnown RBP11.63□□□□□ -0.55
SHTN1-204ENST00000392903 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
SHTN1-204ENST00000392903 AMTNQ6UX39 209 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 TTC9CQ8N5M4 171 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 AAMDCQ9H7C9 122 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 IGSF10Q6WRI0 2623 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 C1orf122Q6ZSJ8 110 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 MTURNQ8N3F0 131 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 CNFNQ9BYD5 112 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 CELSR2Q9HCU4 2923 aa11.62□□□□□ -0.55
SHTN1-204ENST00000392903 MAPKAPK5-AS1Q8N8E1 139 aa11.61□□□□□ -0.55
SHTN1-204ENST00000392903 GEMIN7Q9H840 131 aaKnown RBP11.61□□□□□ -0.55
SHTN1-204ENST00000392903 TNFRSF6BO95407 300 aa11.61□□□□□ -0.55
SHTN1-204ENST00000392903 EFNA4P52798 201 aa11.61□□□□□ -0.55
SHTN1-204ENST00000392903 RNF125Q96EQ8 232 aa11.61□□□□□ -0.55
SHTN1-204ENST00000392903 SIRPDQ9H106 197 aa11.61□□□□□ -0.55
SHTN1-204ENST00000392903 CACNA1AO00555 2505 aa11.61□□□□□ -0.55
SHTN1-204ENST00000392903 ZNF575Q86XF7 245 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 ATP6V0E2Q8NHE4 81 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 TMEM158Q8WZ71 300 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 PRR25Q96S07 402 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 IGLV11-55A0A075B6I3 123 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 TRAV40A0A0B4J280 105 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 LINC01619G3V211 115 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 GAS8-AS1O95177 125 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
SHTN1-204ENST00000392903 HIST1H4GQ99525 98 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms