RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 DEFB136Q30KP8 78 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 RBPMS2Q6ZRY4 209 aaKnown RBP8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 OR11H1Q8NG94 326 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 HIVEP2P31629 2446 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 HLA-DQA1P01909 254 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 SLURP1P55000 103 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 KHDC1LQ5JSQ8 128 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 KLHL30-AS1Q8NEE0 82 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 OR1N2Q8NGR9 330 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 LINC01006Q8NI28 216 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 LENEPQ9Y5L5 61 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 A0A1B0GXF2 115 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 ID1P41134 155 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 ZNF80P51504 273 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 SRSF2Q01130 221 aaKnown RBP8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 DPF1Q92782 380 aa8.64□□□□□ -1.03
SMARCAL1-203ENST00000392128 IGKV3-7A0A075B6H7 116 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 TSTD3H0UI37 97 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 NDUFA7O95182 113 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 OR10J6PQ8NGY7 276 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 TMEM189A5PLL7 270 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 J3KRW8 73 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 M0QZ24 198 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 GZMBP10144 247 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 Q6AWC8 147 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 PGLYRP4Q96LB8 373 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 MS4A6AQ9H2W1 248 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 PEMTQ9UBM1 199 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 MTORP42345 2549 aa8.63□□□□□ -1.03
SMARCAL1-203ENST00000392128 FABP5P3A8MUU1 101 aa8.62□□□□□ -1.03
SMARCAL1-203ENST00000392128 RPS20P60866 119 aaKnown RBP8.62□□□□□ -1.03
SMARCAL1-203ENST00000392128 HBBP68871 147 aa8.62□□□□□ -1.03
SMARCAL1-203ENST00000392128 SELENOKQ9Y6D0 94 aa8.62□□□□□ -1.03
SMARCAL1-203ENST00000392128 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
SMARCAL1-203ENST00000392128 OR8A1Q8NGG7 326 aa8.62□□□□□ -1.03
SMARCAL1-203ENST00000392128 OR9G4Q8NGQ1 327 aa8.62□□□□□ -1.03
SMARCAL1-203ENST00000392128 K7EQG2 157 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 CD28P10747 220 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 ZNF25P17030 456 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 HIST1H1AQ02539 215 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 GDF5OSQ5U4N7 250 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 HAX1O00165 279 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 ZNF705DP0CH99 300 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 ZNF705BP0CI00 300 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 FHL3Q13643 280 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 PYY3Q5JQD4 70 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 HIST3H2BBQ8N257 126 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 FAM19A4Q96LR4 140 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 DUX3Q96PT4 197 aa8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 TSSC4Q9Y5U2 329 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-203ENST00000392128 INAFM1C9JVW0 142 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 APCSP02743 223 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 DLX4Q92988 240 aaPredicted RBP8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 RAX2Q96IS3 184 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 TMEM208Q9BTX3 173 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 NF1P21359 2839 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 A0A1B0GUT8 65 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 CAMPP49913 170 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 CITED2Q99967 270 aaPredicted RBP8.6□□□□□ -1.03
SMARCAL1-203ENST00000392128 A0A1B0GW15 77 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 IFITM10A6NMD0 228 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 F6UB75 175 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 DEFB1P60022 68 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 SLAQ13239 276 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 ZNF575Q86XF7 245 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 RNF114Q9Y508 228 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 TMSB15BA0A087X1C1 80 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 TMEM238C9JI98 176 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 ORM1P02763 201 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 CSN3P07498 182 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 CRISP2P16562 243 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 PAFAH1B2P68402 229 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 RIGQ13278 110 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 HIST2H2BDQ6DRA6 164 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 APRG1Q8IVJ8 170 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 ZFAND2AQ8N6M9 145 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 C11orf44Q8N8P7 122 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 NDUFAF3Q9BU61 184 aa8.59□□□□□ -1.03
SMARCAL1-203ENST00000392128 TRAV2A0A0B4J234 112 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 TCF21O43680 179 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 ARMS2P0C7Q2 107 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 CTRLP40313 264 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 TFPI2P48307 235 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 PROK1P58294 105 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 BORCS7Q96B45 105 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 GRIFINA4D1Z8 144 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms