RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 MGPP08493 103 aa11.34□□□□□ -0.59
LRRFIP1-204ENST00000392000 ZNF672Q499Z4 452 aaPredicted RBP11.34□□□□□ -0.59
LRRFIP1-204ENST00000392000 LINC00311Q8N616 119 aa11.34□□□□□ -0.59
LRRFIP1-204ENST00000392000 SONP18583 2426 aaKnown RBP11.34□□□□□ -0.59
LRRFIP1-204ENST00000392000 FAM208BQ5VWN6 2430 aa11.34□□□□□ -0.59
LRRFIP1-204ENST00000392000 TRBV25-1A0A075B6N4 114 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 CLEC3BP05452 202 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 RPL7P18124 248 aaKnown RBP11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 CDSNQ15517 529 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 CLEC19AQ6UXS0 136 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 NEGR1Q7Z3B1 354 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 ZNF502Q8TBZ5 544 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 POLQO75417 2590 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 SMIM17P0DL12 118 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 H3BVH4 76 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 OR4X2Q8NGF9 303 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 OR9G4Q8NGQ1 327 aa11.33□□□□□ -0.6
LRRFIP1-204ENST00000392000 TMEM14CQ9P0S9 112 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 CCL21O00585 134 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 TNFRSF13BO14836 293 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 AZU1P20160 251 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 BMI1P35226 326 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 ZNF418Q8TF45 676 aaPredicted RBP11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 CFHR4Q92496 578 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 ZNF479Q96JC4 524 aa11.32□□□□□ -0.6
LRRFIP1-204ENST00000392000 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 G3V4G9 280 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 MAPKAPK5-AS1Q8N8E1 139 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 G3V318 75 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 APOMO95445 188 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 VKORC1Q9BQB6 163 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 CRYGBP07316 175 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 Q6AWC8 147 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 CLEC2AQ6UVW9 174 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 VPS13CQ709C8 3753 aa11.31□□□□□ -0.6
LRRFIP1-204ENST00000392000 C15orf32Q32M92 178 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 ACACBO00763 2458 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 A0A1B0GWB2 263 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 INSL3P51460 131 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 DPM2O94777 84 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 UFSP1Q6NVU6 142 aa11.3□□□□□ -0.6
LRRFIP1-204ENST00000392000 H7C2G1 150 aa11.29□□□□□ -0.6
LRRFIP1-204ENST00000392000 SRD5A1P18405 259 aa11.29□□□□□ -0.6
LRRFIP1-204ENST00000392000 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.64e-7■■■■□ 22.8
LRRFIP1-204ENST00000392000 ODF1Q14990 250 aa11.29□□□□□ -0.6
LRRFIP1-204ENST00000392000 ZNF562Q6V9R5 426 aa11.29□□□□□ -0.6
LRRFIP1-204ENST00000392000 B9A039 149 aa11.28□□□□□ -0.6
LRRFIP1-204ENST00000392000 IGF1P05019 195 aa11.28□□□□□ -0.6
LRRFIP1-204ENST00000392000 A0A1B0GW15 77 aa11.28□□□□□ -0.6
LRRFIP1-204ENST00000392000 OVOL3O00110 214 aa11.28□□□□□ -0.6
LRRFIP1-204ENST00000392000 KAAG1Q9UBP8 84 aa11.28□□□□□ -0.6
LRRFIP1-204ENST00000392000 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.6
LRRFIP1-204ENST00000392000 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.6
LRRFIP1-204ENST00000392000 TMEM219Q86XT9 240 aa11.27□□□□□ -0.6
LRRFIP1-204ENST00000392000 CD300EQ496F6 205 aaPredicted RBP11.27□□□□□ -0.61
LRRFIP1-204ENST00000392000 TTC9CQ8N5M4 171 aa11.27□□□□□ -0.61
LRRFIP1-204ENST00000392000 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.61
LRRFIP1-204ENST00000392000 LINC01548A6NM66 108 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 CTSGP08311 255 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 OR5A1Q8NGJ0 315 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 RAB1BQ9H0U4 201 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 C11orf21Q9P2W6 132 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 SMAD5-AS1Q9Y6J3 95 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 RNF185Q96GF1 192 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 UBTD1Q9HAC8 227 aa11.26□□□□□ -0.61
LRRFIP1-204ENST00000392000 CEACAM3P40198 252 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 C16orf92Q96LL3 132 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 AGPAT4-IT1Q9H0P7 198 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 MRPL16Q9NX20 251 aaKnown RBP11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 F5H697 171 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 ZNF493Q6ZR52 646 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 OR11H2Q8NH07 326 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 PTH2Q96A98 100 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 SIGMAR1Q99720 223 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 HHLA3Q9XRX5 114 aa11.25□□□□□ -0.61
LRRFIP1-204ENST00000392000 TIMD4Q96H15 378 aa11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 ZFYVE26Q68DK2 2539 aa11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms