RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CD33P20138 364 aa13.81□□□□□ -0.2
ACTN4-202ENST00000390009 PMCHP20382 165 aa13.81□□□□□ -0.2
ACTN4-202ENST00000390009 EDN2P20800 178 aa13.81□□□□□ -0.2
ACTN4-202ENST00000390009 ZNF575Q86XF7 245 aa13.81□□□□□ -0.2
ACTN4-202ENST00000390009 TLN2Q9Y4G6 2542 aa13.81□□□□□ -0.2
ACTN4-202ENST00000390009 G0S2P27469 103 aa13.81□□□□□ -0.2
ACTN4-202ENST00000390009 PPP1R14DQ9NXH3 145 aa13.81□□□□□ -0.2
ACTN4-202ENST00000390009 IGKV3-7A0A075B6H7 116 aa13.8□□□□□ -0.2
ACTN4-202ENST00000390009 ZNF705DP0CH99 300 aaPredicted RBP13.8□□□□□ -0.2
ACTN4-202ENST00000390009 ZNF705BP0CI00 300 aaPredicted RBP13.8□□□□□ -0.2
ACTN4-202ENST00000390009 RAB4AP20338 218 aa13.8□□□□□ -0.2
ACTN4-202ENST00000390009 MYOZ3Q8TDC0 251 aa13.8□□□□□ -0.2
ACTN4-202ENST00000390009 NAGKQ9UJ70 344 aa13.8□□□□□ -0.2
ACTN4-202ENST00000390009 CCDC168Q8NDH2 2452 aa13.8□□□□□ -0.2
ACTN4-202ENST00000390009 IGLC6P0CF74 106 aa13.79□□□□□ -0.2
ACTN4-202ENST00000390009 CTRLP40313 264 aa13.79□□□□□ -0.2
ACTN4-202ENST00000390009 LINC01559Q495D7 138 aa13.79□□□□□ -0.2
ACTN4-202ENST00000390009 FER1L6-AS1Q8NA97 138 aa13.79□□□□□ -0.2
ACTN4-202ENST00000390009 UFC1Q9Y3C8 167 aa13.79□□□□□ -0.2
ACTN4-202ENST00000390009 SELENOKQ9Y6D0 94 aa13.79□□□□□ -0.2
ACTN4-202ENST00000390009 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
ACTN4-202ENST00000390009 HELZ2Q9BYK8 2649 aaKnown RBP13.79□□□□□ -0.2
ACTN4-202ENST00000390009 TMEM213A2RRL7 107 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 LGALS1P09382 135 aaKnown RBP13.78□□□□□ -0.2
ACTN4-202ENST00000390009 ZNF493Q6ZR52 646 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 MUC21A0A0G2JKD1 596 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 MUC21A0A140T8X8 626 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 OVOL1O14753 267 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 HSBP1O75506 76 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 HIST1H1AQ02539 215 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-202ENST00000390009 MUC21Q5SSG8 566 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 RNASEKQ6P5S7 137 aaKnown RBP13.78□□□□□ -0.2
ACTN4-202ENST00000390009 Q8N2B8 174 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 UBE2E2Q96LR5 201 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 RNF114Q9Y508 228 aa13.78□□□□□ -0.2
ACTN4-202ENST00000390009 FAM181BA6NEQ2 426 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 NTF3P20783 257 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 NIT1Q86X76 327 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 TEX29Q8N6K0 151 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 RNF152Q8N8N0 203 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 OR10J6PQ8NGY7 276 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 URB1-AS1Q96HZ7 61 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 LENEPQ9Y5L5 61 aa13.77□□□□□ -0.21
ACTN4-202ENST00000390009 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.21
ACTN4-202ENST00000390009 PDZD2O15018 2839 aa13.76□□□□□ -0.21
ACTN4-202ENST00000390009 SRD5A1P18405 259 aa13.76□□□□□ -0.21
ACTN4-202ENST00000390009 LINC00477Q96M19 166 aa13.76□□□□□ -0.21
ACTN4-202ENST00000390009 C11orf21Q9P2W6 132 aa13.76□□□□□ -0.21
ACTN4-202ENST00000390009 IGKV3D-20A0A0C4DH25 116 aa13.76□□□□□ -0.21
ACTN4-202ENST00000390009 DEFB1P60022 68 aa13.76□□□□□ -0.21
ACTN4-202ENST00000390009 M0QZ24 198 aa13.75□□□□□ -0.21
ACTN4-202ENST00000390009 ZNF25P17030 456 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-202ENST00000390009 IGHV4OR15-8A0A075B7B6 117 aa13.75□□□□□ -0.21
ACTN4-202ENST00000390009 A0A087WW49 117 aa13.75□□□□□ -0.21
ACTN4-202ENST00000390009 KRTDAPP60985 99 aa13.75□□□□□ -0.21
ACTN4-202ENST00000390009 TWIST1Q15672 202 aa13.75□□□□□ -0.21
ACTN4-202ENST00000390009 SONP18583 2426 aaKnown RBP13.74□□□□□ -0.21
ACTN4-202ENST00000390009 PRR9Q5T870 116 aa13.74□□□□□ -0.21
ACTN4-202ENST00000390009 TMEM86BQ8N661 226 aa13.74□□□□□ -0.21
ACTN4-202ENST00000390009 CNFNQ9BYD5 112 aa13.74□□□□□ -0.21
ACTN4-202ENST00000390009 F6UB75 175 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 SYNJ2BPP57105 145 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 OR8A1Q8NGG7 326 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 DCANP1Q8TF63 244 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 M0R2Z0 102 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 ZNF705AQ6ZN79 300 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-202ENST00000390009 Q6ZQT7 251 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 MRPL52Q86TS9 123 aaKnown RBP13.73□□□□□ -0.21
ACTN4-202ENST00000390009 AMN1Q8IY45 258 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 KLHDC1Q8N7A1 406 aa13.73□□□□□ -0.21
ACTN4-202ENST00000390009 CHCHD1Q96BP2 118 aaKnown RBP13.73□□□□□ -0.21
ACTN4-202ENST00000390009 LGALS9O00182 355 aa13.72□□□□□ -0.21
ACTN4-202ENST00000390009 HOXD3P31249 432 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-202ENST00000390009 ZFAND2AQ8N6M9 145 aa13.72□□□□□ -0.21
ACTN4-202ENST00000390009 LINC00614P0C842 121 aa13.72□□□□□ -0.21
ACTN4-202ENST00000390009 SAMD13Q5VXD3 122 aa13.72□□□□□ -0.21
ACTN4-202ENST00000390009 TMEM208Q9BTX3 173 aa13.72□□□□□ -0.21
ACTN4-202ENST00000390009 J3KRW8 73 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 ID1P41134 155 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 TEX43Q6ZNM6 134 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 FOXC2Q99958 501 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 C20orf144Q9BQM9 153 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 MSRB1Q9NZV6 116 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 MYO9AB2RTY4 2548 aa13.71□□□□□ -0.21
ACTN4-202ENST00000390009 ITPR2Q14571 2701 aa13.71□□□□□ -0.22
ACTN4-202ENST00000390009 C3orf79P0CE67 100 aa13.7□□□□□ -0.22
ACTN4-202ENST00000390009 KRTAP1-1Q07627 177 aa13.7□□□□□ -0.22
ACTN4-202ENST00000390009 FAM19A4Q96LR4 140 aa13.7□□□□□ -0.22
ACTN4-202ENST00000390009 D6R8Y8 96 aa13.7□□□□□ -0.22
ACTN4-202ENST00000390009 DLEU1O43261 78 aa13.7□□□□□ -0.22
ACTN4-202ENST00000390009 Q8N976 141 aa13.7□□□□□ -0.22
ACTN4-202ENST00000390009 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
ACTN4-202ENST00000390009 DNAJC9-AS1A6NH13 148 aa13.69□□□□□ -0.22
ACTN4-202ENST00000390009 CSN3P07498 182 aa13.69□□□□□ -0.22
ACTN4-202ENST00000390009 PMCHL1Q16048 86 aa13.69□□□□□ -0.22
ACTN4-202ENST00000390009 TDRG1Q3Y452 100 aa13.69□□□□□ -0.22
ACTN4-202ENST00000390009 MRPL51Q4U2R6 128 aaKnown RBP13.69□□□□□ -0.22
ACTN4-202ENST00000390009 C18orf65Q6ZTR6 163 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1367.4 ms