RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 UTF1Q5T230 341 aa12.34□□□□□ -0.43
ALK-201ENST00000389048 SPATA25Q9BR10 227 aa12.34□□□□□ -0.43
ALK-201ENST00000389048 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
ALK-201ENST00000389048 LRRC37A2A6NM11 1700 aa12.34□□□□□ -0.43
ALK-201ENST00000389048 PHF3Q92576 2039 aaKnown RBP12.34□□□□□ -0.43
ALK-201ENST00000389048 TIMM17AQ99595 171 aa12.34□□□□□ -0.43
ALK-201ENST00000389048 EGR2P11161 476 aaPredicted RBP12.34□□□□□ -0.43
ALK-201ENST00000389048 TRBV6-6A0A0A6YYG2 114 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 CHKB-CPT1BH3BT56 60 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 PDE6HQ13956 83 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 WFDC9Q8NEX5 89 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 DKK4Q9UBT3 224 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 C5orf38Q86SI9 138 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 COL4A6Q14031 1691 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 ZNF503-AS2A6NEH8 195 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 BAALC-AS2P0C853 105 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 PI4KAP42356 2102 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 RHODO00212 210 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 DOCK11Q5JSL3 2073 aa12.33□□□□□ -0.44
ALK-201ENST00000389048 SDK2Q58EX2 2172 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 H3BRN7 92 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 C12orf74Q32Q52 190 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 MYO7BQ6PIF6 2116 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 PCP2Q8IVA1 136 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 K7EN84 100 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 SCN5AQ14524 2016 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 Q9H8V8 135 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 TRAV13-2A0A0B4J235 113 aa12.32□□□□□ -0.44
ALK-201ENST00000389048 IGHV3-30P01768 117 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 IGHV3-30-5P0DP03 117 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 DAND5Q8N907 189 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 SVIPQ8NHG7 77 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 NCR3O14931 201 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 ZNF134P52741 427 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 TET1Q8NFU7 2136 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 RALGAPA2Q2PPJ7 1873 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 LCTP09848 1927 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 Q6ZR03 302 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 NRXN2Q9P2S2 1712 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 U3KQE9 123 aa12.31□□□□□ -0.44
ALK-201ENST00000389048 MED12Q93074 2177 aa12.3□□□□□ -0.44
ALK-201ENST00000389048 TMEM258P61165 79 aa12.3□□□□□ -0.44
ALK-201ENST00000389048 WT1-ASQ06250 92 aa12.3□□□□□ -0.44
ALK-201ENST00000389048 IGHG2P01859 326 aa12.3□□□□□ -0.44
ALK-201ENST00000389048 CR1LQ2VPA4 569 aa12.3□□□□□ -0.44
ALK-201ENST00000389048 APOC4P55056 127 aa12.3□□□□□ -0.44
ALK-201ENST00000389048 DYNAPQ8N1N2 210 aa12.3□□□□□ -0.44
ALK-201ENST00000389048 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
ALK-201ENST00000389048 IGHV2-70DA0A0C4DH43 119 aa12.29□□□□□ -0.44
ALK-201ENST00000389048 HERVK_113P63121 156 aa12.29□□□□□ -0.44
ALK-201ENST00000389048 LGALS9BQ3B8N2 356 aa12.29□□□□□ -0.44
ALK-201ENST00000389048 LGALS9CQ6DKI2 356 aa12.29□□□□□ -0.44
ALK-201ENST00000389048 VOPP1Q96AW1 172 aa12.29□□□□□ -0.44
ALK-201ENST00000389048 BUB3O43684 328 aa12.28□□□□□ -0.44
ALK-201ENST00000389048 YPEL3P61236 119 aaPredicted RBP12.28□□□□□ -0.44
ALK-201ENST00000389048 FXYD5Q96DB9 178 aa12.28□□□□□ -0.44
ALK-201ENST00000389048 ARFGEF3Q5TH69 2177 aa12.28□□□□□ -0.44
ALK-201ENST00000389048 TRAV4A0A0B4J268 109 aa12.28□□□□□ -0.44
ALK-201ENST00000389048 COX7B2Q8TF08 81 aa12.28□□□□□ -0.44
ALK-201ENST00000389048 ANK1P16157 1881 aa12.28□□□□□ -0.44
ALK-201ENST00000389048 C14orf132Q9NPU4 83 aa12.28□□□□□ -0.44
ALK-201ENST00000389048 F8VRH5 84 aa12.27□□□□□ -0.44
ALK-201ENST00000389048 ORMDL1Q9P0S3 153 aa12.27□□□□□ -0.45
ALK-201ENST00000389048 SCN10AQ9Y5Y9 1956 aa12.27□□□□□ -0.45
ALK-201ENST00000389048 FNDC10F2Z333 226 aa12.27□□□□□ -0.45
ALK-201ENST00000389048 AKAP6Q13023 2319 aa12.27□□□□□ -0.45
ALK-201ENST00000389048 WFDC11Q8NEX6 87 aa12.26□□□□□ -0.45
ALK-201ENST00000389048 KMT2EQ8IZD2 1858 aa12.26□□□□□ -0.45
ALK-201ENST00000389048 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
ALK-201ENST00000389048 NDUFA4O00483 81 aa12.26□□□□□ -0.45
ALK-201ENST00000389048 IGHV2-5P01817 119 aa12.26□□□□□ -0.45
ALK-201ENST00000389048 NPBQ8NG41 125 aa12.26□□□□□ -0.45
ALK-201ENST00000389048 MRPL53Q96EL3 112 aaKnown RBP12.25□□□□□ -0.45
ALK-201ENST00000389048 NCOR1P1Q9H4R4 102 aa12.25□□□□□ -0.45
ALK-201ENST00000389048 FHL1Q13642 323 aa12.25□□□□□ -0.45
ALK-201ENST00000389048 DOCK10Q96BY6 2186 aa12.25□□□□□ -0.45
ALK-201ENST00000389048 IGHV7-4-1A0A0J9YVY3 117 aa12.25□□□□□ -0.45
ALK-201ENST00000389048 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
ALK-201ENST00000389048 TEX48A0A1B0GUV7 120 aa12.25□□□□□ -0.45
ALK-201ENST00000389048 LINC00173Q6ZV60 143 aa12.24□□□□□ -0.45
ALK-201ENST00000389048 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
ALK-201ENST00000389048 SLURP1P55000 103 aa12.24□□□□□ -0.45
ALK-201ENST00000389048 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
ALK-201ENST00000389048 CT83Q5H943 113 aa12.24□□□□□ -0.45
ALK-201ENST00000389048 CEP250Q9BV73 2442 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 IGLV3-9A0A075B6K5 115 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 DEFB4AO15263 64 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 CFC1BP0CG36 223 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 CFC1P0CG37 223 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 Q6ZS49 121 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 RNF183Q96D59 192 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 SPANXA1Q9NS26 97 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 RBAKDNA6NC62 111 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 SPRNQ5BIV9 151 aa12.23□□□□□ -0.45
ALK-201ENST00000389048 Q6ZS92 163 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms