RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PF4V1P10720 104 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 BLCAPP62952 87 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 MUC21Q5SSG8 566 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 C8orf86Q6ZUL3 223 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 SMPXQ9UHP9 88 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 ZNF580Q9UK33 172 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 CSMD1Q96PZ7 3565 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 PRR31Q5SQ13 230 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 TMEM78Q5T7P6 136 aa9.69□□□□□ -0.86
VPS16-202ENST00000380445 TMSB15BA0A087X1C1 80 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 IGHV3-49A0A0A0MS15 119 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 RNF182Q8N6D2 247 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 GLMPQ8WWB7 406 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 PEF1Q9UBV8 284 aaKnown RBP9.68□□□□□ -0.86
VPS16-202ENST00000380445 GAGE10A6NGK3 116 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 IGLV1-40P01703 118 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 ERCC8Q13216 396 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 C12orf54Q6X4T0 127 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
VPS16-202ENST00000380445 COL12A1Q99715 3063 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 PRAC2D3DTV9 90 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 CD5LO43866 347 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 ORM1P02763 201 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 ZNF80P51504 273 aaPredicted RBP9.67□□□□□ -0.86
VPS16-202ENST00000380445 ZNF138P52744 262 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 TP73-AS1Q9UF72 201 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 OR5AL1P0C617 328 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 OR4X2Q8NGF9 303 aa9.67□□□□□ -0.86
VPS16-202ENST00000380445 TGFAP01135 160 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 HIST1H1AQ02539 215 aaPredicted RBP9.66□□□□□ -0.86
VPS16-202ENST00000380445 LOXL1Q08397 574 aaPredicted RBP9.66□□□□□ -0.86
VPS16-202ENST00000380445 EBLN2Q6P2I7 272 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 NPFFR1Q9GZQ6 430 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 AGPAT4-IT1Q9H0P7 198 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 A0A096LNT2 108 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 C2orf70A6NJV1 201 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 IGLC6P0CF74 106 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 PET117Q6UWS5 81 aa9.66□□□□□ -0.86
VPS16-202ENST00000380445 IGHV1-24A0A0C4DH33 117 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 KLK15Q9H2R5 256 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 LENEPQ9Y5L5 61 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 MYO18BQ8IUG5 2567 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 USP9XQ93008 2570 aaPredicted RBP9.65□□□□□ -0.86
VPS16-202ENST00000380445 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 LEPROTL1O95214 131 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 IGHV3-11P01762 117 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 CRYBA4P53673 196 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 CFHR3Q02985 330 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 DEFB112Q30KQ8 113 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 UNQ9165/PRO28630Q6UXU0 137 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 IL17RELQ6ZVW7 336 aa9.65□□□□□ -0.86
VPS16-202ENST00000380445 A1L4Q6 167 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 TWIST1Q15672 202 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 Q6ZS46 218 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 GTF2H5Q6ZYL4 71 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 SELENOKQ9Y6D0 94 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 SCGB1A1P11684 91 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 AZU1P20160 251 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS16-202ENST00000380445 SMAGPQ0VAQ4 97 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 ORMDL3Q8N138 153 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 CNFNQ9BYD5 112 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 BEX4Q9NWD9 120 aaPredicted RBP9.64□□□□□ -0.87
VPS16-202ENST00000380445 FLNCQ14315 2725 aa9.64□□□□□ -0.87
VPS16-202ENST00000380445 TMEM89A2RUT3 159 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
VPS16-202ENST00000380445 SLC25A34Q6PIV7 304 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 ST20Q9HBF5 79 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 SPG11Q96JI7 2443 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 SMAD7O15105 426 aaKnown RBP9.63□□□□□ -0.87
VPS16-202ENST00000380445 IGHV4-59P01825 116 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 FA2HQ7L5A8 372 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 LRRC75A-AS1Q8N1F1 130 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 HSPB8Q9UJY1 196 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 U3KQK5 164 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 OVOL1O14753 267 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 CSN3P07498 182 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 TMEM191AQ9H0A3 160 aa9.63□□□□□ -0.87
VPS16-202ENST00000380445 DAZ1Q9NQZ3 744 aaKnown RBP9.63□□□□□ -0.87
VPS16-202ENST00000380445 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.62□□□□□ -0.871e-6■■■■■ 27.6
VPS16-202ENST00000380445 SVEP1Q4LDE5 3571 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 C7orf71A4D174 169 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 AMN1Q8IY45 258 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 IGHV7-4-1A0A0J9YVY3 117 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 911.5 ms