RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 CD33P20138 364 aa11.19□□□□□ -0.62
RAB3IP-203ENST00000378809 KLF5Q13887 457 aaPredicted RBP11.19□□□□□ -0.62
RAB3IP-203ENST00000378809 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
RAB3IP-203ENST00000378809 F6UB75 175 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 GPX1P07203 203 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 TFPI2P48307 235 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 TWIST1Q15672 202 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 Q6ZWC4 215 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 Q8N2B8 174 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 FAM19A2Q8N3H0 131 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 DNAJC9-AS1A6NH13 148 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 HSBP1O75506 76 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 DEFB136Q30KP8 78 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 TMEM86BQ8N661 226 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
RAB3IP-203ENST00000378809 TLN2Q9Y4G6 2542 aa11.17□□□□□ -0.62
RAB3IP-203ENST00000378809 M0QZ24 198 aa11.17□□□□□ -0.62
RAB3IP-203ENST00000378809 ID1P41134 155 aa11.17□□□□□ -0.62
RAB3IP-203ENST00000378809 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
RAB3IP-203ENST00000378809 DNLZQ5SXM8 178 aa11.17□□□□□ -0.62
RAB3IP-203ENST00000378809 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
RAB3IP-203ENST00000378809 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 IGLC6P0CF74 106 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 CTRLP40313 264 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 OR8A1Q8NGG7 326 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 PDZD2O15018 2839 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 FLNAP21333 2647 aaKnown RBP11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 AKAP9Q99996 3911 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 CD5LO43866 347 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 KRTDAPP60985 99 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 Q6ZQT7 251 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 REC114Q7Z4M0 266 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 NIT1Q86X76 327 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 C11orf21Q9P2W6 132 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 NAGKQ9UJ70 344 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
RAB3IP-203ENST00000378809 KRTAP1-1Q07627 177 aa11.15□□□□□ -0.62
RAB3IP-203ENST00000378809 PRR9Q5T870 116 aa11.15□□□□□ -0.62
RAB3IP-203ENST00000378809 GATD1Q8NB37 220 aa11.15□□□□□ -0.62
RAB3IP-203ENST00000378809 DCANP1Q8TF63 244 aa11.15□□□□□ -0.62
RAB3IP-203ENST00000378809 M0R2Z0 102 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 Q6ZSV7 163 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 ZNF575Q86XF7 245 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 LGALS9O00182 355 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 CSN3P07498 182 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 SLURP1P55000 103 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 HIST2H2BDQ6DRA6 164 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 PRO1933Q9H354 126 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 ESM1Q9NQ30 184 aa11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 SONP18583 2426 aaKnown RBP11.14□□□□□ -0.63
RAB3IP-203ENST00000378809 CUBNO60494 3623 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 DPF1Q92782 380 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 DUX3Q96PT4 197 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 TSTD3H0UI37 97 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 FAM104BQ5XKR9 115 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 ZFAND2AQ8N6M9 145 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 MSRB1Q9NZV6 116 aa11.13□□□□□ -0.63
RAB3IP-203ENST00000378809 TRAV21A0A0B4J279 112 aa11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 D6R8Y8 96 aa11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 LINC01619G3V211 115 aa11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 PMCHL1Q16048 86 aa11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 KLHL30-AS1Q8NEE0 82 aa11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 URB1-AS1Q96HZ7 61 aa11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 RNF114Q9Y508 228 aa11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 TIMM8BQ9Y5J9 83 aaPredicted RBP11.12□□□□□ -0.63
RAB3IP-203ENST00000378809 UNC79Q9P2D8 2635 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 LINC00614P0C842 121 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 TCTEX1D4Q5JR98 221 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 ITPR2Q14571 2701 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 PKIAP61925 76 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 WFDC12Q8WWY7 111 aa11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 CHCHD1Q96BP2 118 aaKnown RBP11.11□□□□□ -0.63
RAB3IP-203ENST00000378809 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
RAB3IP-203ENST00000378809 MRPL51Q4U2R6 128 aaKnown RBP11.1□□□□□ -0.63
RAB3IP-203ENST00000378809 ORMDL3Q8N138 153 aa11.1□□□□□ -0.63
RAB3IP-203ENST00000378809 CNFNQ9BYD5 112 aa11.1□□□□□ -0.63
RAB3IP-203ENST00000378809 H3BVH4 76 aa11.09□□□□□ -0.63
RAB3IP-203ENST00000378809 CKS2P33552 79 aa11.09□□□□□ -0.63
RAB3IP-203ENST00000378809 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
RAB3IP-203ENST00000378809 OR1N2Q8NGR9 330 aa11.09□□□□□ -0.63
RAB3IP-203ENST00000378809 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
RAB3IP-203ENST00000378809 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms