RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CD69Q07108 199 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 RSPO1Q2MKA7 263 aaPredicted RBP9.35□□□□□ -0.91
NPHP4-202ENST00000378161 METRNQ9UJH8 293 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 MKI67P46013 3256 aaKnown RBP9.35□□□□□ -0.91
NPHP4-202ENST00000378161 TRGV8A0A0C4DH27 118 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 PINLYPA6NC86 204 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 NTN3O00634 580 aaPredicted RBP9.35□□□□□ -0.91
NPHP4-202ENST00000378161 DUTP33316 252 aaKnown RBP9.35□□□□□ -0.91
NPHP4-202ENST00000378161 B3GALT5-AS1P59052 145 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 S100A7L2Q5SY68 101 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 COL6A6A6NMZ7 2263 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 IGHV1-2P23083 117 aa9.34□□□□□ -0.91
NPHP4-202ENST00000378161 TEX36Q5VZQ5 186 aa9.34□□□□□ -0.91
NPHP4-202ENST00000378161 C16orf97H3BN30 126 aa9.34□□□□□ -0.91
NPHP4-202ENST00000378161 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
NPHP4-202ENST00000378161 ZNF407Q9C0G0 2248 aa9.34□□□□□ -0.91
NPHP4-202ENST00000378161 U3KQE9 123 aa9.34□□□□□ -0.91
NPHP4-202ENST00000378161 UPK2O00526 184 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 HCP5Q6MZN7 132 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 PRORYQ9H606 182 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 FOXA2Q9Y261 457 aaPredicted RBP9.33□□□□□ -0.92
NPHP4-202ENST00000378161 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
NPHP4-202ENST00000378161 IL17RELQ6ZVW7 336 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 CFHR4Q92496 578 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 ZNF883P0CG24 379 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 APELAP0DMC3 54 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 SMCPP49901 116 aaPredicted RBP9.33□□□□□ -0.92
NPHP4-202ENST00000378161 Q8N8P6 123 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 NCOA6Q14686 2063 aaPredicted RBP9.33□□□□□ -0.92
NPHP4-202ENST00000378161 FOXF2Q12947 444 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 C20orf204Q6ZNR8 217 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
NPHP4-202ENST00000378161 IGHV3-21A0A0B4J1V1 117 aa9.32□□□□□ -0.92
NPHP4-202ENST00000378161 A0A1W2PRX2 142 aa9.32□□□□□ -0.92
NPHP4-202ENST00000378161 PSPNO60542 156 aa9.32□□□□□ -0.92
NPHP4-202ENST00000378161 RNASE2P10153 161 aaKnown RBP9.32□□□□□ -0.92
NPHP4-202ENST00000378161 HCFC1P51610 2035 aa9.32□□□□□ -0.92
NPHP4-202ENST00000378161 THADAQ6YHU6 1953 aa9.32□□□□□ -0.92
NPHP4-202ENST00000378161 F5H697 171 aa9.32□□□□□ -0.92
NPHP4-202ENST00000378161 NUP210Q8TEM1 1887 aaPredicted RBP9.32□□□□□ -0.92
NPHP4-202ENST00000378161 CIRBPQ14011 172 aaKnown RBP9.31□□□□□ -0.92
NPHP4-202ENST00000378161 SERP2Q8N6R1 65 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 AKAP6Q13023 2319 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
NPHP4-202ENST00000378161 TNFRSF13BO14836 293 aaPredicted RBP9.31□□□□□ -0.92
NPHP4-202ENST00000378161 CRYGBP07316 175 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 PRSS46E5RG02 174 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 FER1L5A0AVI2 2057 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 ZGRF1Q86YA3 2104 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 IGHV3-72A0A0B4J1Y9 119 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 ATP1A1-AS1Q5TC04 95 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 PRR7Q8TB68 274 aa9.31□□□□□ -0.92
NPHP4-202ENST00000378161 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
NPHP4-202ENST00000378161 USF3Q68DE3 2245 aa9.3□□□□□ -0.92
NPHP4-202ENST00000378161 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
NPHP4-202ENST00000378161 SS18L1O75177 396 aaPredicted RBP9.3□□□□□ -0.92
NPHP4-202ENST00000378161 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
NPHP4-202ENST00000378161 FHL3Q13643 280 aa9.3□□□□□ -0.92
NPHP4-202ENST00000378161 ZNF71Q9NQZ8 489 aaPredicted RBP9.3□□□□□ -0.92
NPHP4-202ENST00000378161 CUL9Q8IWT3 2517 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 TANC2Q9HCD6 1990 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 FAM240AA0A1B0GVK7 77 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 OVOL1O14753 267 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 TRAV3A0A0B4J244 114 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 IGHG2P01859 326 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 DSCAML1Q8TD84 2053 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 PCNX1Q96RV3 2341 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 SAA2P0DJI9 122 aaPredicted RBP9.29□□□□□ -0.92
NPHP4-202ENST00000378161 WNK2Q9Y3S1 2297 aa9.29□□□□□ -0.92
NPHP4-202ENST00000378161 LINC00473A8K010 186 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 PCNX3Q9H6A9 2034 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 SMIM26A0A096LP01 95 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 PRCDQ00LT1 54 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 Q0VFX4 171 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 METTL26Q96S19 204 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 AGPAT4-IT1Q9H0P7 198 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 OBSL1O75147 1896 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 AGRNO00468 2067 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 LINC01619G3V211 115 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 EFNA4P52798 201 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 UBE2D3P61077 147 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 UBE2D2P62837 147 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 EXOC3-AS1Q8N2X6 119 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 RNF138Q8WVD3 245 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 PROK2Q9HC23 129 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 SRRM5B3KS81 715 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 J3QQQ9 107 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 FAM201AQ5SY85 155 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 FDCSPQ8NFU4 85 aa9.28□□□□□ -0.92
NPHP4-202ENST00000378161 TRBV7-7A0A0K0K1E9 115 aa9.27□□□□□ -0.92
NPHP4-202ENST00000378161 NDUFC2-KCTD14E9PQ53 114 aa9.27□□□□□ -0.92
NPHP4-202ENST00000378161 Q6ZSR3 168 aa9.27□□□□□ -0.92
NPHP4-202ENST00000378161 RNF182Q8N6D2 247 aa9.27□□□□□ -0.92
NPHP4-202ENST00000378161 TMEM105Q8N8V8 129 aa9.27□□□□□ -0.92
NPHP4-202ENST00000378161 ARFGEF3Q5TH69 2177 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms