RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 IGHV2-70P01814 119 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 GRNP28799 593 aaKnown RBP14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 PRR20EP86478 221 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 PRR20CP86479 221 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 PRR20DP86480 221 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 PRR20BP86481 221 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 PRR20AP86496 221 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 MRPL51Q4U2R6 128 aaKnown RBP14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 MRPL52Q86TS9 123 aaKnown RBP14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 ZNF491Q8N8L2 437 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 C11orf52Q96A22 123 aa14.11□□□□□ -0.15
CNTNAP3-204ENST00000377656 IGHV7-4-1A0A0J9YVY3 117 aa14.1□□□□□ -0.15
CNTNAP3-204ENST00000377656 RNF138Q8WVD3 245 aa14.1□□□□□ -0.15
CNTNAP3-204ENST00000377656 FXYD5Q96DB9 178 aa14.1□□□□□ -0.15
CNTNAP3-204ENST00000377656 ZNF625Q96I27 306 aaPredicted RBP14.1□□□□□ -0.15
CNTNAP3-204ENST00000377656 DLEU1O43261 78 aa14.1□□□□□ -0.15
CNTNAP3-204ENST00000377656 FAM120AOSQ5T036 256 aa14.1□□□□□ -0.15
CNTNAP3-204ENST00000377656 NEGR1Q7Z3B1 354 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 LYPD6Q86Y78 171 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 GAGE12BA1L429 117 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 CD5LO43866 347 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 GAGE7O76087 117 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 GAGE12FP0CL80 117 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 GAGE12GP0CL81 117 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 GAGE12IP0CL82 117 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 PMVKQ15126 192 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 ZNF114Q8NC26 417 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 OVOL2Q9BRP0 275 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 PTPN13Q12923 2485 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 INS-IGF2F8WCM5 200 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 DYSFO75923 2080 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 TNCP24821 2201 aa14.09□□□□□ -0.15
CNTNAP3-204ENST00000377656 IGLC7A0M8Q6 106 aa14.08□□□□□ -0.16
CNTNAP3-204ENST00000377656 SLAQ13239 276 aa14.08□□□□□ -0.16
CNTNAP3-204ENST00000377656 ZNRF2Q8NHG8 242 aa14.08□□□□□ -0.16
CNTNAP3-204ENST00000377656 H3BUA1 57 aa14.08□□□□□ -0.16
CNTNAP3-204ENST00000377656 ZC2HC1AQ96GY0 325 aa14.08□□□□□ -0.16
CNTNAP3-204ENST00000377656 SMIM27A0A1W2PRY6 76 aa14.07□□□□□ -0.16
CNTNAP3-204ENST00000377656 GAGE2BQ13066 116 aa14.07□□□□□ -0.16
CNTNAP3-204ENST00000377656 GAGE2EQ4V326 116 aa14.07□□□□□ -0.16
CNTNAP3-204ENST00000377656 GAGE2DQ9UEU5 116 aa14.07□□□□□ -0.16
CNTNAP3-204ENST00000377656 IGF2-ASQ6U949 168 aa14.07□□□□□ -0.16
CNTNAP3-204ENST00000377656 Q71RC1 249 aaPredicted RBP14.07□□□□□ -0.16
CNTNAP3-204ENST00000377656 TRAV8-3A0A0A6YYJ7 113 aa14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 C20orf144Q9BQM9 153 aa14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 ANAPC13Q9BS18 74 aa14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 NDUFS6O75380 124 aaKnown RBP14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 ATP6V0BQ99437 205 aa14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 DKK4Q9UBT3 224 aa14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 F8WEM9 126 aa14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 NUP210Q8TEM1 1887 aaPredicted RBP14.06□□□□□ -0.16
CNTNAP3-204ENST00000377656 APOC4P55056 127 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 DEFB112Q30KQ8 113 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 TMEM243Q9BU79 118 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 TRAV26-2A0A0B4J265 109 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 ZNF561-AS1K7EIQ3 104 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 TCF15Q12870 199 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 DNAJC30Q96LL9 226 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 OTOGLQ3ZCN5 2332 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 HOXB4P17483 251 aaPredicted RBP14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 OR11H6Q8NGC7 330 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 VPREB3Q9UKI3 123 aa14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 POLR3KQ9Y2Y1 108 aaPredicted RBP14.05□□□□□ -0.16
CNTNAP3-204ENST00000377656 SMIM2Q9BVW6 85 aa14.04□□□□□ -0.16
CNTNAP3-204ENST00000377656 LHBP01229 141 aa14.04□□□□□ -0.16
CNTNAP3-204ENST00000377656 IGHV4-59P01825 116 aa14.04□□□□□ -0.16
CNTNAP3-204ENST00000377656 UBE2V1Q13404 147 aa14.04□□□□□ -0.16
CNTNAP3-204ENST00000377656 Q6ZSR3 168 aa14.04□□□□□ -0.16
CNTNAP3-204ENST00000377656 FGF23Q9GZV9 251 aaPredicted RBP14.03□□□□□ -0.16
CNTNAP3-204ENST00000377656 IGHV3-38A0A0C4DH36 116 aa14.03□□□□□ -0.16
CNTNAP3-204ENST00000377656 CENPVL3A0A0U1RRI6 287 aa14.03□□□□□ -0.16
CNTNAP3-204ENST00000377656 VWC2LB2RUY7 222 aa14.03□□□□□ -0.16
CNTNAP3-204ENST00000377656 SIGLEC8Q9NYZ4 499 aa14.03□□□□□ -0.16
CNTNAP3-204ENST00000377656 NPYP01303 97 aa14.02□□□□□ -0.16
CNTNAP3-204ENST00000377656 HLA-DRB4P13762 266 aa14.02□□□□□ -0.16
CNTNAP3-204ENST00000377656 HLA-DRB4X5D2U9 266 aa14.02□□□□□ -0.16
CNTNAP3-204ENST00000377656 HIVEP2P31629 2446 aa14.02□□□□□ -0.16
CNTNAP3-204ENST00000377656 HIST1H4AP62805 103 aaKnown RBP14.02□□□□□ -0.16
CNTNAP3-204ENST00000377656 OCIAD2Q56VL3 154 aa14.02□□□□□ -0.16
CNTNAP3-204ENST00000377656 KLF12Q9Y4X4 402 aa14.02□□□□□ -0.17
CNTNAP3-204ENST00000377656 EML6Q6ZMW3 1958 aa14.02□□□□□ -0.17
CNTNAP3-204ENST00000377656 C9JAW5 83 aa14.02□□□□□ -0.17
CNTNAP3-204ENST00000377656 TECTAO75443 2155 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 IGHV1-24A0A0C4DH33 117 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 PFN2P35080 140 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 SRSF2Q01130 221 aaKnown RBP14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 C17orf77Q96MU5 243 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 IGHV4-61A0A0C4DH41 118 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 GAGE6Q13070 117 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 SPRNQ5BIV9 151 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 PYGO2Q9BRQ0 406 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 AGPAT4-IT1Q9H0P7 198 aa14.01□□□□□ -0.17
CNTNAP3-204ENST00000377656 COL4A3Q01955 1670 aa14□□□□□ -0.17
CNTNAP3-204ENST00000377656 LGALS9BQ3B8N2 356 aa14□□□□□ -0.17
CNTNAP3-204ENST00000377656 LGALS9CQ6DKI2 356 aa14□□□□□ -0.17
CNTNAP3-204ENST00000377656 KLF2Q9Y5W3 355 aaPredicted RBP14□□□□□ -0.17
CNTNAP3-204ENST00000377656 HOXD3P31249 432 aaPredicted RBP14□□□□□ -0.17
CNTNAP3-204ENST00000377656 FOXI2Q6ZQN5 318 aa14□□□□□ -0.17
CNTNAP3-204ENST00000377656 SPAG8Q99932 426 aaPredicted RBP14□□□□□ -0.17
CNTNAP3-204ENST00000377656 LTAP01374 205 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms