RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CDX1P47902 265 aaPredicted RBP6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 TNRC6BQ9UPQ9 1833 aaKnown RBP6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 RAI1Q7Z5J4 1906 aaPredicted RBP6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 SH2D1AO60880 128 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 MYCNOSP40205 109 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 CDKN1BP46527 198 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 SMAGPQ0VAQ4 97 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 PDE6HQ13956 83 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 MAP1LC3CQ9BXW4 147 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 A0A096LPF7 62 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 SPRY2O43597 315 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 HILS1P60008 231 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 LYPD1Q8N2G4 141 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 PHLDA1Q8WV24 401 aaPredicted RBP6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 VGLL1Q99990 258 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 H3BRN7 92 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 BRWD1-AS2P59051 145 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 Q1RN00 199 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 LYZL1Q6UWQ5 148 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 MBD6Q96DN6 1003 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 ESM1Q9NQ30 184 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 DNAH14Q0VDD8 3507 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 A0A1B0GV72 72 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 FSTL3O95633 263 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 NCR2O95944 276 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 DDTP30046 118 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 ELOBQ15370 118 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 OR10J3Q5JRS4 329 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM101Q96IK0 257 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 C8orf49Q96NF6 230 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 SPAG8Q99932 426 aaPredicted RBP6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM238LA0A1B0GVL6 79 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 LINC00574Q9H8X3 128 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 IGLL1P15814 213 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 DEFB135Q30KP9 77 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 PRADC1Q9BSG0 188 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 CRLF1O75462 422 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 IGHG4P01861 327 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM75Q8N9X5 138 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 SLC25A2Q9BXI2 301 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 SMAD5-AS1Q9Y6J3 95 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 EXPH5Q8NEV8 1989 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 SPEGQ15772 3267 aa6.55□□□□□ -1.36
CRNKL1-202ENST00000377340 GGTLC3B5MD39 225 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 LEPROTL1O95214 131 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 PRSS2P07478 247 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 FAM90A2PQ658T7 463 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 ORMDL3Q8N138 153 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 DIRC3C9JPN6 131 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 APOHP02749 345 aaPredicted RBP6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 ADMP35318 185 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 THAP8Q8NA92 274 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 WIPF2Q8TF74 440 aaPredicted RBP6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 ATMQ13315 3056 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 IGKV1OR2-108A0A075B7D4 117 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 K7ERU9 68 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 CRYGCP07315 174 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 LYL1P12980 280 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 HERVK_113P61574 105 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 RPL36AP83881 106 aaKnown RBP6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 Q6AWC8 147 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 SHISA2Q6UWI4 295 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 MIEN1Q9BRT3 115 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
CRNKL1-202ENST00000377340 BUB3O43684 328 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 PRR20EP86478 221 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 PRR20CP86479 221 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 PRR20DP86480 221 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 PRR20BP86481 221 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 PRR20AP86496 221 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 OSTCQ9NRP0 149 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 HSPB8Q9UJY1 196 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 COL12A1Q99715 3063 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 ZZEF1O43149 2961 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 A0A0J9YY99 117 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 ATRAIDQ6UW56 229 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 TRAV1-1A0A0B4J248 108 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 C7orf71A4D174 169 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 LY6LH3BQJ8 138 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 NMUP48645 174 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 IL15RAQ13261 267 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 Q86TA4 180 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 DEFB125Q8N687 156 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 C4orf3Q8WVX3 66 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 ZNF414Q96IQ9 312 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 AGPAT4-IT1Q9H0P7 198 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE12JA6NER3 117 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE1Q13065 139 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE4Q13068 117 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE5Q13069 117 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms