RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 EFNA4P52798 201 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 C10orf142B7Z368 130 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 ETDBQ3ZM63 59 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 ERG28Q9UKR5 140 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 VCYO14598 125 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 ZNF688P0C7X2 276 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 BRD3OSQ6XYD6 125 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 RITA1Q96K30 269 aa13.3□□□□□ -0.28
VARS-215ENST00000375663 G3V318 75 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 RRN3P1Q2M238 152 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 DTX2Q86UW9 622 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 A0A1W2PPM0 123 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 TMEM262E9PQX1 116 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 CD28P10747 220 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 EGR2P11161 476 aaPredicted RBP13.29□□□□□ -0.28
VARS-215ENST00000375663 DAZAP2Q15038 168 aaPredicted RBP13.29□□□□□ -0.28
VARS-215ENST00000375663 FAM110DQ8TAY7 271 aaPredicted RBP13.29□□□□□ -0.28
VARS-215ENST00000375663 SPOCK3Q9BQ16 436 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
VARS-215ENST00000375663 TRAV26-2A0A0B4J265 109 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 FCN3O75636 299 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 PCP2Q8IVA1 136 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 TRAV12-3A0A0B4J271 114 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 HLA-DMBP28068 263 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 EIF4EBP1Q13541 118 aaPredicted RBP13.28□□□□□ -0.28
VARS-215ENST00000375663 ANKRD39Q53RE8 183 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 UTF1Q5T230 341 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 LINC01545Q5VT33 79 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 CDKN1BP46527 198 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 IGFL2Q6UWQ7 119 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 TEX29Q8N6K0 151 aa13.28□□□□□ -0.28
VARS-215ENST00000375663 IGKV3D-20A0A0C4DH25 116 aa13.27□□□□□ -0.28
VARS-215ENST00000375663 DUSP14O95147 198 aaKnown RBP13.27□□□□□ -0.28
VARS-215ENST00000375663 IGLV2-8P01709 118 aa13.27□□□□□ -0.29
VARS-215ENST00000375663 ZNF876PQ49A33 203 aa13.27□□□□□ -0.29
VARS-215ENST00000375663 ITLN2Q8WWU7 325 aaPredicted RBP13.27□□□□□ -0.29
VARS-215ENST00000375663 LINC01587Q99440 93 aa13.27□□□□□ -0.29
VARS-215ENST00000375663 A0A087WWL8 130 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 H3BUX3 64 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 NDUFS8O00217 210 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 DNAL4O96015 105 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 PRSS33Q8NF86 280 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 RHPN1-AS1Q9BWJ2 59 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 RANBP2P49792 3224 aaKnown RBP13.26□□□□□ -0.29
VARS-215ENST00000375663 UNC80Q8N2C7 3258 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 CGB3P0DN86 165 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 CGB7P0DN87 165 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 TP53TG3Q9ULZ0 132 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 SIVA1O15304 175 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 C8orf86Q6ZUL3 223 aa13.26□□□□□ -0.29
VARS-215ENST00000375663 C2orf70A6NJV1 201 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 I3L2K1 104 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 K7EIM0 57 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 K7ERJ3 54 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 BPESC1Q9GZL8 116 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 TMEM238C9JI98 176 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 SEM1Q6ZVN7 128 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
VARS-215ENST00000375663 HIVEP2P31629 2446 aa13.24□□□□□ -0.29
VARS-215ENST00000375663 ANAPC13Q9BS18 74 aa13.24□□□□□ -0.29
VARS-215ENST00000375663 KIAA1549Q9HCM3 1950 aa13.24□□□□□ -0.29
VARS-215ENST00000375663 TSPAN13O95857 204 aa13.24□□□□□ -0.29
VARS-215ENST00000375663 A0A0C4DFX4 3053 aa13.24□□□□□ -0.29
VARS-215ENST00000375663 SLC25A16P16260 332 aa13.24□□□□□ -0.29
VARS-215ENST00000375663 F8VRH5 84 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 SMIM2Q9BVW6 85 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
VARS-215ENST00000375663 TRGV11A0A075B6L2 103 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 OVOL3O00110 214 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 UBE2E1P51965 193 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 C1orf229Q6ZS94 237 aaPredicted RBP13.23□□□□□ -0.29
VARS-215ENST00000375663 DYNAPQ8N1N2 210 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 TANC2Q9HCD6 1990 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 A0A0U1RRA0 63 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 TAX1BP3O14907 124 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 IGFBPL1Q8WX77 278 aa13.23□□□□□ -0.29
VARS-215ENST00000375663 FAM223BA6NKX1 122 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 FAM223AQ8IWN6 122 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 USMG5Q96IX5 58 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 TNRC6AQ8NDV7 1962 aaKnown RBP13.22□□□□□ -0.29
VARS-215ENST00000375663 IGLV2-23P01705 113 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 GATA1P15976 413 aaPredicted RBP13.22□□□□□ -0.29
VARS-215ENST00000375663 CKS1BP61024 79 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 PLEKHB2Q96CS7 222 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 USP9YO00507 2555 aaPredicted RBP13.22□□□□□ -0.29
VARS-215ENST00000375663 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 MSRB1Q9NZV6 116 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 TOMM7Q9P0U1 55 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 TP53TG1Q9Y2A0 90 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
VARS-215ENST00000375663 H3BMG7 143 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 AMTNQ6UX39 209 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 OR13C6PQ8NH95 151 aa13.22□□□□□ -0.29
VARS-215ENST00000375663 USP9XQ93008 2570 aaPredicted RBP13.21□□□□□ -0.29
VARS-215ENST00000375663 IGKV1D-37A0A075B6S9 117 aa13.21□□□□□ -0.29
VARS-215ENST00000375663 PRADC1Q9BSG0 188 aa13.21□□□□□ -0.29
VARS-215ENST00000375663 MYMXA0A1B0GTQ4 84 aa13.21□□□□□ -0.29
VARS-215ENST00000375663 SHISA9B4DS77 424 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms