RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PCNX3Q9H6A9 2034 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 NTN3O00634 580 aaPredicted RBP6.04□□□□□ -1.44
USP48-203ENST00000374732 TNP2Q05952 138 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 REG3AQ06141 175 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 PIK3CD-AS1Q5SR53 167 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 LYPD6Q86Y78 171 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 PTPRBP23467 1997 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 UBE2L6O14933 153 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 GCHFRP30047 84 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 ZNF627Q7L945 461 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 ARHGAP21Q5T5U3 1957 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 HEATR1Q9H583 2144 aaKnown RBP6.04□□□□□ -1.44
USP48-203ENST00000374732 UBE2L5PA0A1B0GUS4 154 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 RPS27P42677 84 aaKnown RBP6.04□□□□□ -1.44
USP48-203ENST00000374732 C16orf47Q6ZP98 133 aaPredicted RBP6.04□□□□□ -1.44
USP48-203ENST00000374732 Q6ZS49 121 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 SERP2Q8N6R1 65 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 MPLKIPQ8TAP9 179 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 PSMG3-AS1Q96PY0 264 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 DEFB126Q9BYW3 111 aa6.04□□□□□ -1.44
USP48-203ENST00000374732 RP1P56715 2156 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 UNC13CQ8NB66 2214 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 TRAV9-1A0A075B6T8 112 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 LEPROTL1O95214 131 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 LINC00173Q6ZV60 143 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 Q8N2B8 174 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 TAF15Q92804 592 aaKnown RBP eCLIP6.03□□□□□ -1.44
USP48-203ENST00000374732 IMMP1LQ96LU5 166 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 IGHV1-45A0A0A0MS14 117 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 FRMD6-AS1P0C7T7 363 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 SYNJ2BPP57105 145 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 OR5AS1Q8N127 324 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 LINC00337Q8N6G1 96 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 TMEM252Q8N6L7 170 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 ZNF491Q8N8L2 437 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 C19orf73Q9NVV2 129 aa6.03□□□□□ -1.44
USP48-203ENST00000374732 TCRBV4S1A1TA0A5B7 111 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 FHL2Q14192 279 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 LINC01545Q5VT33 79 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 MORN5Q5VZ52 161 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 FAM57BQ71RH2 274 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 RNASE6Q93091 150 aaKnown RBP6.02□□□□□ -1.45
USP48-203ENST00000374732 HDHD3Q9BSH5 251 aaPredicted RBP6.02□□□□□ -1.45
USP48-203ENST00000374732 TAS2R4Q9NYW5 299 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 A0A0G2JNJ9 132 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 NDUFS7O75251 213 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 IL4P05112 153 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 LINC00313P59037 77 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 SFTA2Q6UW10 78 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 Q75L30 129 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 NTN5Q8WTR8 489 aaPredicted RBP6.02□□□□□ -1.45
USP48-203ENST00000374732 Q9UFV3 132 aa6.02□□□□□ -1.45
USP48-203ENST00000374732 TRBV27A0A0K0K1C4 114 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 NDUFB3O43676 98 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 FOXL2NBQ6ZUU3 175 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 MYOZ3Q8TDC0 251 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 ZNF706Q9Y5V0 76 aaPredicted RBP6.01□□□□□ -1.45
USP48-203ENST00000374732 CACNA1EQ15878 2313 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 TANC2Q9HCD6 1990 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 PRB4P10163 310 aaPredicted RBP6.01□□□□□ -1.45
USP48-203ENST00000374732 RBMY1FQ15415 496 aaKnown RBP6.01□□□□□ -1.45
USP48-203ENST00000374732 C10orf128Q5T292 105 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 PROK2Q9HC23 129 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 SEC16AO15027 2179 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 CRYM-AS1A6NIL9 109 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 COX7A2LO14548 114 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 FAM223AQ8IWN6 122 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 LHFPL6Q9Y693 200 aa6.01□□□□□ -1.45
USP48-203ENST00000374732 DNAH14Q0VDD8 3507 aa6□□□□□ -1.45
USP48-203ENST00000374732 KNL1Q8NG31 2342 aa6□□□□□ -1.45
USP48-203ENST00000374732 CTSZQ9UBR2 303 aa6□□□□□ -1.45
USP48-203ENST00000374732 ASXL3Q9C0F0 2248 aa6□□□□□ -1.45
USP48-203ENST00000374732 SLC25A20O43772 301 aa6□□□□□ -1.45
USP48-203ENST00000374732 SUMO2P61956 95 aaKnown RBP6□□□□□ -1.45
USP48-203ENST00000374732 ZFP2Q6ZN57 461 aa6□□□□□ -1.45
USP48-203ENST00000374732 C11orf72Q8NBR9 251 aa6□□□□□ -1.45
USP48-203ENST00000374732 LINC00588Q9Y4M8 146 aa6□□□□□ -1.45
USP48-203ENST00000374732 IGLV3-1P01715 115 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 MP68P56378 58 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 PIEZO1Q92508 2521 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 LTAP01374 205 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 CCKP06307 115 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 LCA10Q71F78 164 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 FREM3P0C091 2139 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 KIF26BQ2KJY2 2108 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 COL27A1Q8IZC6 1860 aaPredicted RBP5.99□□□□□ -1.45
USP48-203ENST00000374732 TMEM14DPA8MWL7 114 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 FOLR3P41439 243 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 GFRALQ6UXV0 394 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 ZNF645Q8N7E2 425 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 SLC50A1Q9BRV3 221 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 IL36BQ9NZH7 164 aa5.99□□□□□ -1.45
USP48-203ENST00000374732 PI4KAP42356 2102 aa5.98□□□□□ -1.45
USP48-203ENST00000374732 IGHV1-24A0A0C4DH33 117 aa5.98□□□□□ -1.45
USP48-203ENST00000374732 H0Y9J4 135 aa5.98□□□□□ -1.45
USP48-203ENST00000374732 Q6ZVQ6 151 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms