RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PF4V1P10720 104 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 GATA3P23771 443 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 BLCAPP62952 87 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 USMG5Q96IX5 58 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 MIEN1Q9BRT3 115 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 MUC21A0A0G2JKD1 596 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 MUC21A0A140T8X8 626 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 CSN3P07498 182 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 ZNF138P52744 262 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 MUC21Q5SSG8 566 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 EBLN2Q6P2I7 272 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 FER1L6-AS1Q8NA97 138 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
HMGCL-202ENST00000374487 FBN1P35555 2871 aaKnown RBP9.27□□□□□ -0.93
HMGCL-202ENST00000374487 IGHV1-24A0A0C4DH33 117 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 TMEM213A2RRL7 107 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 H3BUA1 57 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 RAB4AP20338 218 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 PPIFP30405 207 aaKnown RBP9.26□□□□□ -0.93
HMGCL-202ENST00000374487 TWIST1Q15672 202 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 SPATA45Q537H7 98 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 TMEM78Q5T7P6 136 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 ZNF493Q6ZR52 646 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 C16orf92Q96LL3 132 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 CLEC5AQ9NY25 188 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 U3KQE9 123 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
HMGCL-202ENST00000374487 C2orf70A6NJV1 201 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 M0R143 59 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 NDUFA4O00483 81 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 TRBV12-3P01733 135 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 RIPPLY3P57055 190 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 PRSS3P2Q8NHM4 247 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 C2orf88Q9BSF0 95 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 TMEM70Q9BUB7 260 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 AGPAT4-IT1Q9H0P7 198 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 KLK15Q9H2R5 256 aa9.25□□□□□ -0.93
HMGCL-202ENST00000374487 TRAV8-2A0A0B4J237 113 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 OR5AL1P0C617 328 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 UNQ9165/PRO28630Q6UXU0 137 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 Q6ZS46 218 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 MRPL53Q96EL3 112 aaKnown RBP9.24□□□□□ -0.93
HMGCL-202ENST00000374487 A0A0G2JLM5 398 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 A0A1B0GV90 55 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 BRI3O95415 125 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 SRD5A1P18405 259 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 KLHDC1Q8N7A1 406 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 OR4X2Q8NGF9 303 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 TMEM160Q9NX00 188 aa9.24□□□□□ -0.93
HMGCL-202ENST00000374487 D6R8Y8 96 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 CTRLP40313 264 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 RPL11P62913 178 aaKnown RBP9.23□□□□□ -0.93
HMGCL-202ENST00000374487 FA2HQ7L5A8 372 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 GLMPQ8WWB7 406 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 SNHG12Q9BXW3 62 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 TIMM8BQ9Y5J9 83 aaPredicted RBP9.23□□□□□ -0.93
HMGCL-202ENST00000374487 EREGO14944 169 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 IGLC6P0CF74 106 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 LCNL1Q6ZST4 164 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 ORMDL3Q8N138 153 aa9.23□□□□□ -0.93
HMGCL-202ENST00000374487 C9orf139Q6ZV77 190 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 ZNF738Q8NE65 137 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 MAP1LC3CQ9BXW4 147 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 NPFFR1Q9GZQ6 430 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 HSPB8Q9UJY1 196 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 LOC389332A0A1B0GUA5 103 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 C20orf202A1L168 122 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 SYS1-DBNDD2H3BUS1 97 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 IGLV1-40P01703 118 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 CKS2P33552 79 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 HIST1H1AQ02539 215 aaPredicted RBP9.22□□□□□ -0.93
HMGCL-202ENST00000374487 DEFB112Q30KQ8 113 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 LINC01559Q495D7 138 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 C9orf47Q6ZRZ4 202 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 MDFIQ99750 246 aa9.22□□□□□ -0.93
HMGCL-202ENST00000374487 TRAV9-2A0A087WT02 112 aa9.21□□□□□ -0.94
HMGCL-202ENST00000374487 IGHV4-59P01825 116 aa9.21□□□□□ -0.94
HMGCL-202ENST00000374487 MAJINQ3KP22 176 aa9.21□□□□□ -0.94
HMGCL-202ENST00000374487 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.94
HMGCL-202ENST00000374487 LINC00173Q6ZV60 143 aa9.21□□□□□ -0.94
HMGCL-202ENST00000374487 UQCR10Q9UDW1 63 aa9.21□□□□□ -0.94
HMGCL-202ENST00000374487 U3KQK5 164 aa9.21□□□□□ -0.94
HMGCL-202ENST00000374487 J3QLI3 93 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 CRXO43186 299 aaPredicted RBP9.2□□□□□ -0.94
HMGCL-202ENST00000374487 IFI27P40305 119 aaPredicted RBP9.2□□□□□ -0.94
HMGCL-202ENST00000374487 ZNF575Q86XF7 245 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 ZMAT5Q9UDW3 170 aaKnown RBP9.2□□□□□ -0.94
HMGCL-202ENST00000374487 H0Y8G0 127 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 FSHBP01225 129 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 OR10J6PQ8NGY7 276 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 OR10AG1Q8NH19 301 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms