RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 MRPL27Q9P0M9 148 aaKnown RBP6.12□□□□□ -1.43
HERC4-202ENST00000373700 USP24Q9UPU5 2620 aa6.12□□□□□ -1.43
HERC4-202ENST00000373700 TRAV12-3A0A0B4J271 114 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 F6UB75 175 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 H3BRN7 92 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 RASL11AQ6T310 242 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 LINC00322Q6ZN03 302 aaPredicted RBP6.11□□□□□ -1.43
HERC4-202ENST00000373700 GTSCR1Q86UQ5 136 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 RHPN1-AS1Q9BWJ2 59 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 EMP1P54849 157 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 DEFB112Q30KQ8 113 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 FAM231DQ6ZW35 169 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 LINC01356Q8N9X3 169 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 MSRB1Q9NZV6 116 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 IGHV1-24A0A0C4DH33 117 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 A0A1B0GW15 77 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 H3BUT2 72 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 PET117Q6UWS5 81 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 DTX2Q86UW9 622 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 LYPD1Q8N2G4 141 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 GTSF1Q8WW33 167 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 C2orf88Q9BSF0 95 aa6.11□□□□□ -1.43
HERC4-202ENST00000373700 IGHV3-73A0A0B4J1V6 119 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 IGHV7-81A0A0B4J1V7 117 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 C1orf122Q6ZSJ8 110 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 PIP4P2Q8N4L2 257 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 C1orf159Q96HA4 380 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 IGF2BP2-AS1Q96M15 143 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 KIR2DL4Q99706 377 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 PRSS22Q9GZN4 317 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 CHD6Q8TD26 2715 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 ZFHX4Q86UP3 3567 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 A0A087WWL8 130 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 OR11H12B2RN74 326 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 IGLC2P0DOY2 106 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 IGLC3P0DOY3 106 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 PSMB2P49721 201 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 SYNJ2BPP57105 145 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 OR11H1Q8NG94 326 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 OR11H2Q8NH07 326 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 TRAV21A0A0B4J279 112 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 IGKV3OR2-268A0A0C4DH90 116 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.1□□□□□ -1.43
HERC4-202ENST00000373700 J3QKU1 62 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 LTAP01374 205 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 EGR2P11161 476 aaPredicted RBP6.1□□□□□ -1.43
HERC4-202ENST00000373700 GATA1P15976 413 aaPredicted RBP6.1□□□□□ -1.43
HERC4-202ENST00000373700 LMO4P61968 165 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 OR11H6Q8NGC7 330 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 TMEM158Q8WZ71 300 aa6.1□□□□□ -1.43
HERC4-202ENST00000373700 TET2Q6N021 2002 aaPredicted RBP6.09□□□□□ -1.43
HERC4-202ENST00000373700 CTSGP08311 255 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 MRPL51Q4U2R6 128 aaKnown RBP6.09□□□□□ -1.43
HERC4-202ENST00000373700 C8orf86Q6ZUL3 223 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 FAM110DQ8TAY7 271 aaPredicted RBP6.09□□□□□ -1.43
HERC4-202ENST00000373700 BBC3Q96PG8 261 aaPredicted RBP6.09□□□□□ -1.43
HERC4-202ENST00000373700 C20orf144Q9BQM9 153 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 ZNF492Q9P255 531 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 TRBV7-1A0A0A6YYK4 115 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 PSMB11A5LHX3 300 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 IGLV2-8P01709 118 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 HERVK_113P61574 105 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 PDE6HQ13956 83 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 ZNF124Q15973 351 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 DEFB136Q30KP8 78 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 NSUN5P1Q3KNT7 163 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 LDLRAD2Q5SZI1 272 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 C10orf105Q8TEF2 133 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 NPYP01303 97 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 FAM104BQ5XKR9 115 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 AMMECR1LQ6DCA0 310 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 C8orf31Q8N9H6 132 aa6.09□□□□□ -1.43
HERC4-202ENST00000373700 SRSF8Q9BRL6 282 aaKnown RBP6.09□□□□□ -1.43
HERC4-202ENST00000373700 NHP2Q9NX24 153 aaKnown RBP6.09□□□□□ -1.43
HERC4-202ENST00000373700 FLNAP21333 2647 aaKnown RBP6.09□□□□□ -1.43
HERC4-202ENST00000373700 IGHV3-64A0A075B6Q5 118 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 DLEU1O43261 78 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
HERC4-202ENST00000373700 FABP2P12104 132 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 LINC00477Q96M19 166 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 TMEM14CQ9P0S9 112 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 ITPR3Q14573 2671 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 ATP5LO75964 103 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 TNFRSF6BO95407 300 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 NPSP0C0P6 89 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 SLC25A16P16260 332 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
HERC4-202ENST00000373700 NEGR1Q7Z3B1 354 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 Q8N9W7 124 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 SYT8Q8NBV8 401 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 ST20Q9HBF5 79 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 NXT2Q9NPJ8 142 aaKnown RBP6.08□□□□□ -1.44
HERC4-202ENST00000373700 SIGLEC8Q9NYZ4 499 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 NDUFS8O00217 210 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 APOMO95445 188 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 PPBPP02775 128 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 FOXE3Q13461 319 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 ZC2HC1BQ5TFG8 222 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 ZNF843Q8N446 348 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms