RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 UBE2E2Q96LR5 201 aa14.83□□□□□ -0.04
HDAC1-201ENST00000373548 OVOL1O14753 267 aa14.82□□□□□ -0.04
HDAC1-201ENST00000373548 DEFB1P60022 68 aa14.82□□□□□ -0.04
HDAC1-201ENST00000373548 HIST1H1AQ02539 215 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-201ENST00000373548 ZNF493Q6ZR52 646 aa14.82□□□□□ -0.04
HDAC1-201ENST00000373548 C11orf21Q9P2W6 132 aa14.82□□□□□ -0.04
HDAC1-201ENST00000373548 IGHV4OR15-8A0A075B7B6 117 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 A0A087WW49 117 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 MUC21A0A0G2JKD1 596 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 MUC21A0A140T8X8 626 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 LINC00587B1AMM8 73 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 SRD5A1P18405 259 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 SSTP61278 116 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 MUC21Q5SSG8 566 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 FAM19A2Q8N3H0 131 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 SONP18583 2426 aaKnown RBP14.81□□□□□ -0.04
HDAC1-201ENST00000373548 SCGB1D1O95968 90 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 KRTAP1-1Q07627 177 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 TMEM86BQ8N661 226 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 URB1-AS1Q96HZ7 61 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 RNF114Q9Y508 228 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 LENEPQ9Y5L5 61 aa14.81□□□□□ -0.04
HDAC1-201ENST00000373548 IGKV3D-20A0A0C4DH25 116 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 OR10J6PQ8NGY7 276 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 LINC00477Q96M19 166 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 PRR9Q5T870 116 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 RNASEKQ6P5S7 137 aaKnown RBP14.8□□□□□ -0.04
HDAC1-201ENST00000373548 REC114Q7Z4M0 266 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 NIT1Q86X76 327 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 FOXC2Q99958 501 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 NAGKQ9UJ70 344 aa14.8□□□□□ -0.04
HDAC1-201ENST00000373548 Q6ZQT7 251 aa14.79□□□□□ -0.04
HDAC1-201ENST00000373548 F6UB75 175 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 HSBP1O75506 76 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 NTF3P20783 257 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 SYNJ2BPP57105 145 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 DCANP1Q8TF63 244 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 UNC79Q9P2D8 2635 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 M0QZ24 198 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 HOXD3P31249 432 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-201ENST00000373548 ZFAND2AQ8N6M9 145 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 KLHDC1Q8N7A1 406 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 OR8A1Q8NGG7 326 aa14.78□□□□□ -0.04
HDAC1-201ENST00000373548 LGALS9O00182 355 aa14.77□□□□□ -0.04
HDAC1-201ENST00000373548 CNFNQ9BYD5 112 aa14.77□□□□□ -0.04
HDAC1-201ENST00000373548 C18orf65Q6ZTR6 163 aa14.77□□□□□ -0.05
HDAC1-201ENST00000373548 PRO1933Q9H354 126 aa14.77□□□□□ -0.05
HDAC1-201ENST00000373548 DNAJC9-AS1A6NH13 148 aa14.76□□□□□ -0.05
HDAC1-201ENST00000373548 PKIAP61925 76 aa14.76□□□□□ -0.05
HDAC1-201ENST00000373548 TWIST1Q15672 202 aa14.76□□□□□ -0.05
HDAC1-201ENST00000373548 FAM104BQ5XKR9 115 aa14.76□□□□□ -0.05
HDAC1-201ENST00000373548 FAM19A4Q96LR4 140 aa14.76□□□□□ -0.05
HDAC1-201ENST00000373548 WFDC3Q8IUB2 231 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 AMN1Q8IY45 258 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 ZNF664Q8N3J9 261 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 MYO9AB2RTY4 2548 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 CD5LO43866 347 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 ID1P41134 155 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 KRTDAPP60985 99 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 SAMD13Q5VXD3 122 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 MS4A6AQ9H2W1 248 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 MSRB1Q9NZV6 116 aa14.75□□□□□ -0.05
HDAC1-201ENST00000373548 J3KRW8 73 aa14.74□□□□□ -0.05
HDAC1-201ENST00000373548 M0R2Z0 102 aa14.74□□□□□ -0.05
HDAC1-201ENST00000373548 DEFB136Q30KP8 78 aa14.74□□□□□ -0.05
HDAC1-201ENST00000373548 TCTEX1D4Q5JR98 221 aa14.74□□□□□ -0.05
HDAC1-201ENST00000373548 Q6ZSV7 163 aa14.74□□□□□ -0.05
HDAC1-201ENST00000373548 CHCHD1Q96BP2 118 aaKnown RBP14.74□□□□□ -0.05
HDAC1-201ENST00000373548 YAE1D1Q9NRH1 226 aa14.74□□□□□ -0.05
HDAC1-201ENST00000373548 ESM1Q9NQ30 184 aa14.73□□□□□ -0.05
HDAC1-201ENST00000373548 U3KQK5 164 aa14.73□□□□□ -0.05
HDAC1-201ENST00000373548 NOTCH2Q04721 2471 aa14.73□□□□□ -0.05
HDAC1-201ENST00000373548 C2orf70A6NJV1 201 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 TSTD3H0UI37 97 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 LINC00614P0C842 121 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 Q8N976 141 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 ACANP16112 2415 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 D6R8Y8 96 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 C3orf79P0CE67 100 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 TFPI2P48307 235 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 MRPL51Q4U2R6 128 aaKnown RBP14.72□□□□□ -0.05
HDAC1-201ENST00000373548 TMEM191AQ9H0A3 160 aa14.72□□□□□ -0.05
HDAC1-201ENST00000373548 SLURP1P55000 103 aa14.71□□□□□ -0.05
HDAC1-201ENST00000373548 APRG1Q8IVJ8 170 aa14.71□□□□□ -0.05
HDAC1-201ENST00000373548 FLNBO75369 2602 aaKnown RBP14.71□□□□□ -0.05
HDAC1-201ENST00000373548 TRBV7-9A0A0J9YWB2 115 aa14.71□□□□□ -0.06
HDAC1-201ENST00000373548 CSN3P07498 182 aa14.71□□□□□ -0.06
HDAC1-201ENST00000373548 PMCHL1Q16048 86 aa14.71□□□□□ -0.06
HDAC1-201ENST00000373548 TRAV21A0A0B4J279 112 aa14.7□□□□□ -0.06
HDAC1-201ENST00000373548 K7EQG2 157 aa14.7□□□□□ -0.06
HDAC1-201ENST00000373548 KIR3DS1Q14943 382 aa14.7□□□□□ -0.06
HDAC1-201ENST00000373548 DMRTA1Q5VZB9 504 aa14.7□□□□□ -0.06
HDAC1-201ENST00000373548 ADAMTSL5Q6ZMM2 481 aa14.7□□□□□ -0.06
HDAC1-201ENST00000373548 C4orf3Q8WVX3 66 aa14.7□□□□□ -0.06
HDAC1-201ENST00000373548 IGHV1-24A0A0C4DH33 117 aa14.69□□□□□ -0.06
HDAC1-201ENST00000373548 ZNF688P0C7X2 276 aa14.69□□□□□ -0.06
HDAC1-201ENST00000373548 TEX43Q6ZNM6 134 aa14.69□□□□□ -0.06
HDAC1-201ENST00000373548 ORMDL3Q8N138 153 aa14.69□□□□□ -0.06
HDAC1-201ENST00000373548 OR10AG1Q8NH19 301 aa14.69□□□□□ -0.06
HDAC1-201ENST00000373548 RNASE4P34096 147 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms