RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
COL9A2-202ENST00000372748 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
COL9A2-202ENST00000372748 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
COL9A2-202ENST00000372748 CHTOPQ9Y3Y2 248 aaKnown RBP11.47□□□□□ -0.57
COL9A2-202ENST00000372748 LY6LH3BQJ8 138 aa11.47□□□□□ -0.57
COL9A2-202ENST00000372748 DYNAPQ8N1N2 210 aa11.47□□□□□ -0.57
COL9A2-202ENST00000372748 CIDEAO60543 219 aa11.46□□□□□ -0.57
COL9A2-202ENST00000372748 TRGV3P03979 118 aa11.46□□□□□ -0.57
COL9A2-202ENST00000372748 PIFOQ8TCI5 191 aa11.46□□□□□ -0.57
COL9A2-202ENST00000372748 ARPC1AQ92747 370 aa11.46□□□□□ -0.57
COL9A2-202ENST00000372748 IGLV11-55A0A075B6I3 123 aa11.46□□□□□ -0.57
COL9A2-202ENST00000372748 NDPQ00604 133 aa11.46□□□□□ -0.57
COL9A2-202ENST00000372748 ETDBQ3ZM63 59 aa11.46□□□□□ -0.57
COL9A2-202ENST00000372748 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.57
COL9A2-202ENST00000372748 ITPR1Q14643 2758 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 FABP5P3A8MUU1 101 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 IGLL5B9A064 214 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 LCNL1Q6ZST4 164 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 COX8CQ7Z4L0 72 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 TMEM190Q8WZ59 177 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 ZNF479Q96JC4 524 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 TM2D2Q9BX73 214 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 RAXQ9Y2V3 346 aa11.46□□□□□ -0.58
COL9A2-202ENST00000372748 NCBP2LA6PVI3 153 aaKnown RBP11.45□□□□□ -0.58
COL9A2-202ENST00000372748 NDUFA3O95167 84 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 IL17RELQ6ZVW7 336 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 S100A7AQ86SG5 101 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 SIGMAR1Q99720 223 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 SPTAN1Q13813 2472 aaKnown RBP11.45□□□□□ -0.58
COL9A2-202ENST00000372748 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 K7ENP7 123 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 CFHR4Q92496 578 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 RNF5Q99942 180 aa11.45□□□□□ -0.58
COL9A2-202ENST00000372748 SPANXB1Q9NS25 103 aaPredicted RBP11.45□□□□□ -0.58
COL9A2-202ENST00000372748 E9PLD3 99 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
COL9A2-202ENST00000372748 CEACAM3P40198 252 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 EFNA4P52798 201 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 HRNRQ86YZ3 2850 aaPredicted RBP11.44□□□□□ -0.58
COL9A2-202ENST00000372748 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 CCL21O00585 134 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 DPM3Q9P2X0 92 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
COL9A2-202ENST00000372748 SPTBN1Q01082 2364 aaKnown RBP11.43□□□□□ -0.58
COL9A2-202ENST00000372748 PKD1L2Q7Z442 2459 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 CTSGP08311 255 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 C5orf64Q2M2E5 130 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 Q6ZQT7 251 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 PSMG3-AS1Q96PY0 264 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 CNFNQ9BYD5 112 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 LINC01546A6NGU7 62 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 C12orf74Q32Q52 190 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 C11orf21Q9P2W6 132 aa11.43□□□□□ -0.58
COL9A2-202ENST00000372748 IGKV3D-20A0A0C4DH25 116 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 ATP5LO75964 103 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 Q8N8P6 123 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 IGLV2-18A0A075B6J9 118 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 INSL3P51460 131 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 CD300EQ496F6 205 aaPredicted RBP11.42□□□□□ -0.58
COL9A2-202ENST00000372748 MYOZ3Q8TDC0 251 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 CACNA1AO00555 2505 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 AKAP6Q13023 2319 aa11.42□□□□□ -0.58
COL9A2-202ENST00000372748 SPAG8Q99932 426 aaPredicted RBP11.42□□□□□ -0.58
COL9A2-202ENST00000372748 F8W1H4 67 aa11.41□□□□□ -0.58
COL9A2-202ENST00000372748 LY6G5BQ8NDX9 201 aa11.41□□□□□ -0.58
COL9A2-202ENST00000372748 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
COL9A2-202ENST00000372748 IGHV3-49A0A0A0MS15 119 aa11.41□□□□□ -0.58
COL9A2-202ENST00000372748 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
COL9A2-202ENST00000372748 TTC9CQ8N5M4 171 aa11.4□□□□□ -0.58
COL9A2-202ENST00000372748 MSRB2Q9Y3D2 182 aa11.4□□□□□ -0.58
COL9A2-202ENST00000372748 LAGE3Q14657 143 aa11.4□□□□□ -0.58
COL9A2-202ENST00000372748 NPBQ8NG41 125 aa11.4□□□□□ -0.58
COL9A2-202ENST00000372748 SPRY2O43597 315 aa11.39□□□□□ -0.59
COL9A2-202ENST00000372748 PSMG4Q5JS54 123 aa11.39□□□□□ -0.59
COL9A2-202ENST00000372748 ATP5G2Q06055 141 aa11.39□□□□□ -0.59
COL9A2-202ENST00000372748 OR11H6Q8NGC7 330 aa11.39□□□□□ -0.59
COL9A2-202ENST00000372748 GAGE13Q4V321 117 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 SFTA2Q6UW10 78 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 NRACQ8N912 160 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 TIMD4Q96H15 378 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 AGPAT4-IT1Q9H0P7 198 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 A0A087WX48 190 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 J3QR89 54 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 ZNF48Q96MX3 618 aaPredicted RBP11.38□□□□□ -0.59
COL9A2-202ENST00000372748 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
COL9A2-202ENST00000372748 SRSF1Q07955 248 aaKnown RBP eCLIP11.38□□□□□ -0.594e-7■■□□□ 13.9
COL9A2-202ENST00000372748 J3KRW8 73 aa11.37□□□□□ -0.59
COL9A2-202ENST00000372748 SRSF2Q01130 221 aaKnown RBP11.37□□□□□ -0.59
COL9A2-202ENST00000372748 RRN3P1Q2M238 152 aa11.37□□□□□ -0.59
COL9A2-202ENST00000372748 SPANXN1Q5VSR9 72 aa11.37□□□□□ -0.59
COL9A2-202ENST00000372748 EPG5Q9HCE0 2579 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 ZFHX3Q15911 3703 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 ADORA2A-AS1P86434 159 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms