RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 COL27A1Q8IZC6 1860 aaPredicted RBP4.22□□□□□ -1.73
ATG4A-204ENST00000372246 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 CT83Q5H943 113 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 FAM162BQ5T6X4 162 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 ZFP2Q6ZN57 461 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF418Q8TF45 676 aaPredicted RBP4.22□□□□□ -1.73
ATG4A-204ENST00000372246 RNF185Q96GF1 192 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 TRGV9Q99603 122 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 CYSLTR1Q9Y271 337 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 LINC00312Q9Y6C7 94 aa4.22□□□□□ -1.73
ATG4A-204ENST00000372246 TTC28Q96AY4 2481 aa4.21□□□□□ -1.73
ATG4A-204ENST00000372246 ACACAQ13085 2346 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 CNIH1O95406 144 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 LOXP28300 417 aaPredicted RBP4.21□□□□□ -1.74
ATG4A-204ENST00000372246 VMA21Q3ZAQ7 101 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 NFE4Q86UQ8 179 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 ZNF491Q8N8L2 437 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 TMEM178AQ8NBL3 297 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 KIR2DL4Q99706 377 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 SIGLEC9Q9Y336 463 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 FAM215AQ9Y5M1 114 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 SOX21Q9Y651 276 aaPredicted RBP4.21□□□□□ -1.74
ATG4A-204ENST00000372246 SPTBN1Q01082 2364 aaKnown RBP4.21□□□□□ -1.74
ATG4A-204ENST00000372246 A0A1B0GWB2 263 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 I3L2K1 104 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 K7EIM0 57 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 TNFRSF6BO95407 300 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 CT45A10P0DMU9 189 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 GLRXP35754 106 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 KLRD1Q13241 179 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 DEFB109BQ30KR1 87 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 C12orf74Q32Q52 190 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 CD300EQ496F6 205 aaPredicted RBP4.21□□□□□ -1.74
ATG4A-204ENST00000372246 CEND1Q8N111 149 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 HIST1H4GQ99525 98 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 C11orf21Q9P2W6 132 aa4.21□□□□□ -1.74
ATG4A-204ENST00000372246 IGLV3-9A0A075B6K5 115 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 K7EQM0 130 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 IGKCP01834 107 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 IGF1P05019 195 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 HLA-DRB4P13762 266 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 CD59P13987 128 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 PPP1R27Q86WC6 154 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 SYT8Q8NBV8 401 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 KLHL30-AS1Q8NEE0 82 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 OR4X2Q8NGF9 303 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 OR5A1Q8NGJ0 315 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 OR9G4Q8NGQ1 327 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 RNF125Q96EQ8 232 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 SS18L2Q9UHA2 77 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 UFC1Q9Y3C8 167 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 HLA-DRB4X5D2U9 266 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 ZFHX2Q9C0A1 2572 aaPredicted RBP4.2□□□□□ -1.74
ATG4A-204ENST00000372246 RIF1Q5UIP0 2472 aaKnown RBP4.2□□□□□ -1.74
ATG4A-204ENST00000372246 CDX4O14627 284 aaPredicted RBP4.2□□□□□ -1.74
ATG4A-204ENST00000372246 FTH1P19P0C7X4 201 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 IGHV1-8P0DP01 117 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 CD40P25942 277 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 GFRALQ6UXV0 394 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 FOXI2Q6ZQN5 318 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 IL17RELQ6ZVW7 336 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 DYNAPQ8N1N2 210 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 CFHR4Q92496 578 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 PLEKHB2Q96CS7 222 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 SHANK2-AS3Q9BTD1 123 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 SMAD5-AS1Q9Y6J3 95 aa4.2□□□□□ -1.74
ATG4A-204ENST00000372246 PTPRZ1P23471 2315 aaPredicted RBP4.2□□□□□ -1.74
ATG4A-204ENST00000372246 CEP295Q9C0D2 2601 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 IGHV1-3A0A0C4DH29 117 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 LOC107984156A0A0G2JMH3 177 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 E9PLD3 99 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 H3BRN7 92 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 M0QXV9 152 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 MRPS12O15235 138 aaKnown RBP4.19□□□□□ -1.74
ATG4A-204ENST00000372246 IGHG3P01860 377 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 XGP55808 180 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 BSPH1Q075Z2 132 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 ZNF493Q6ZR52 646 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 DTX2Q86UW9 622 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 ARL17AQ8IVW1 177 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 ONECUT1Q9UBC0 465 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 PRO0461Q9UI25 63 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 U3KQK5 164 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 SPTA1P02549 2419 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 TIMM23O14925 209 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 NDUFB3O43676 98 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 SCGB2A1O75556 95 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 APOMO95445 188 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 NDPQ00604 133 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 GAGE13Q4V321 117 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 MORN3Q6PF18 240 aaPredicted RBP4.19□□□□□ -1.74
ATG4A-204ENST00000372246 KRTAP19-1Q8IUB9 90 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 PRR25Q96S07 402 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 SPATA25Q9BR10 227 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 CDIP1Q9H305 208 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 LINC00574Q9H8X3 128 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 VPREB3Q9UKI3 123 aa4.19□□□□□ -1.74
ATG4A-204ENST00000372246 CELSR2Q9HCU4 2923 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 TMEM178BH3BS89 294 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 H3BVH4 76 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 236.9 ms