RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 IGHV1-24A0A0C4DH33 117 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 IGHG4P01861 327 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 MSMBP08118 114 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 IFI27P40305 119 aaPredicted RBP9.06□□□□□ -0.96
PDE6C-201ENST00000371447 LOXL1Q08397 574 aaPredicted RBP9.06□□□□□ -0.96
PDE6C-201ENST00000371447 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 IGKV3-20P01619 116 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 FA2HQ7L5A8 372 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 Q8N976 141 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 ZNF738Q8NE65 137 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 NDFIP1Q9BT67 221 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 UFC1Q9Y3C8 167 aa9.06□□□□□ -0.96
PDE6C-201ENST00000371447 GAS8-AS1O95177 125 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 TEX43Q6ZNM6 134 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 CLPSL1A2RUU4 121 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 SMAD7O15105 426 aaKnown RBP9.05□□□□□ -0.96
PDE6C-201ENST00000371447 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 ESDP10768 282 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 ERASQ7Z444 233 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 RNF223E7ERA6 249 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
PDE6C-201ENST00000371447 FOXE3Q13461 319 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 TM4SF20Q53R12 229 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 SHISA2Q6UWI4 295 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 C8orf86Q6ZUL3 223 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 LYPD1Q8N2G4 141 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 FER1L6-AS1Q8NA97 138 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 C18orf15Q96N68 181 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
PDE6C-201ENST00000371447 CKS2P33552 79 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 HINT1P49773 126 aaPredicted RBP9.04□□□□□ -0.96
PDE6C-201ENST00000371447 HIST2H2BCQ6DN03 193 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 Q6ZVH6 145 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 CCL25O15444 150 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 KRTAP10-9P60411 292 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 PDE6HQ13956 83 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 TMEM78Q5T7P6 136 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
PDE6C-201ENST00000371447 KIR2DL5BA0A0G2JN68 375 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 KIR2DL5BA0A0G2JPC4 375 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 NPIPB6E9PJ23 425 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 KIR2DL5AQ8N109 375 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 OR4B1Q8NGF8 309 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 TMEM70Q9BUB7 260 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 OR4C46A6NHA9 309 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 HNRNPA3P51991 378 aaKnown RBP9.03□□□□□ -0.96
PDE6C-201ENST00000371447 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 CT83Q5H943 113 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 DNLZQ5SXM8 178 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 OR4X2Q8NGF9 303 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 SMIM12Q96EX1 92 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 C2CD3Q4AC94 2353 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 TRAV26-2A0A0B4J265 109 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 HAX1O00165 279 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 PRSS57Q6UWY2 283 aa9.03□□□□□ -0.96
PDE6C-201ENST00000371447 HIST1H1AQ02539 215 aaPredicted RBP9.02□□□□□ -0.97
PDE6C-201ENST00000371447 GFRA4Q9GZZ7 299 aa9.02□□□□□ -0.97
PDE6C-201ENST00000371447 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
PDE6C-201ENST00000371447 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.97
PDE6C-201ENST00000371447 FABP5P3A8MUU1 101 aa9.02□□□□□ -0.97
PDE6C-201ENST00000371447 IGLL1P15814 213 aa9.02□□□□□ -0.97
PDE6C-201ENST00000371447 JMJD1CQ15652 2540 aa9.01□□□□□ -0.97
PDE6C-201ENST00000371447 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
PDE6C-201ENST00000371447 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
PDE6C-201ENST00000371447 KLF5Q13887 457 aaPredicted RBP9.01□□□□□ -0.97
PDE6C-201ENST00000371447 KHDC1LQ5JSQ8 128 aa9.01□□□□□ -0.97
PDE6C-201ENST00000371447 C20orf173Q96LM9 149 aa9.01□□□□□ -0.97
PDE6C-201ENST00000371447 BEX4Q9NWD9 120 aaPredicted RBP9.01□□□□□ -0.97
PDE6C-201ENST00000371447 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
PDE6C-201ENST00000371447 M0R381 172 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 NPYP01303 97 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 COX6B1P14854 86 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 MRPL51Q4U2R6 128 aaKnown RBP9□□□□□ -0.97
PDE6C-201ENST00000371447 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 AGRNO00468 2067 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 TRAV8-2A0A0B4J237 113 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 B4DSR2 109 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 H3BVH4 76 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 OR5AL1P0C617 328 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 SYS1-DBNDD2H3BUS1 97 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 APCP25054 2843 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 ZNF48Q96MX3 618 aaPredicted RBP9□□□□□ -0.97
PDE6C-201ENST00000371447 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
PDE6C-201ENST00000371447 HELZ2Q9BYK8 2649 aaKnown RBP8.99□□□□□ -0.97
PDE6C-201ENST00000371447 HECTD1Q9ULT8 2610 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 IGLC3P0DOY3 106 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 C20orf144Q9BQM9 153 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 SIGLEC8Q9NYZ4 499 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 S100A4P26447 101 aaKnown RBP8.99□□□□□ -0.97
PDE6C-201ENST00000371447 RNASE4P34096 147 aaKnown RBP8.99□□□□□ -0.97
PDE6C-201ENST00000371447 VAMP3Q15836 100 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 ORMDL3Q8N138 153 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 ITPR3Q14573 2671 aa8.99□□□□□ -0.97
PDE6C-201ENST00000371447 NIPBLQ6KC79 2804 aaeCLIP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms