RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 TCF15Q12870 199 aa9.02□□□□□ -0.97
CTCFL-202ENST00000371196 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
CTCFL-202ENST00000371196 TMEM262E9PQX1 116 aa9.02□□□□□ -0.97
CTCFL-202ENST00000371196 SRSF9Q13242 221 aaKnown RBP eCLIP9.02□□□□□ -0.97
CTCFL-202ENST00000371196 LYRM7Q5U5X0 104 aa9.02□□□□□ -0.97
CTCFL-202ENST00000371196 PSMG3-AS1Q96PY0 264 aa9.02□□□□□ -0.97
CTCFL-202ENST00000371196 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
CTCFL-202ENST00000371196 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 A8MWV9 139 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 NHLRC4P0CG21 123 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-202ENST00000371196 PRSS33Q8NF86 280 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 CEP250Q9BV73 2442 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 TRAV26-2A0A0B4J265 109 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 H3BVH4 76 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 NDUFB3O43676 98 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 TCL1BO95988 128 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 TRGV3P03979 118 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 IGFL4Q6B9Z1 124 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 SCGB1D4Q6XE38 83 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 NRACQ8N912 160 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 S4R3C0 116 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 LOC400499M0QZD8 3231 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 GVINP1Q7Z2Y8 2422 aa9.01□□□□□ -0.97
CTCFL-202ENST00000371196 SPENQ96T58 3664 aaKnown RBP9□□□□□ -0.97
CTCFL-202ENST00000371196 IGHV1-8P0DP01 117 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 SHISA2Q6UWI4 295 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 LYPD2Q6UXB3 125 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 CITED1Q99966 193 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 ZZEF1O43149 2961 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 ZNF815PA8K554 130 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 CNIH1O95406 144 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 DLX6P56179 175 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 ANKRD29Q8N6D5 301 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 PRADC1Q9BSG0 188 aa9□□□□□ -0.97
CTCFL-202ENST00000371196 TRBV20-1A0A075B6N2 111 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 TRBV7-9A0A0J9YWB2 115 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 SRD5A1P18405 259 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 HLA-DMBP28068 263 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 CD7P09564 240 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 ANXA2RQ3ZCQ2 193 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 OR11H6Q8NGC7 330 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 VKORC1Q9BQB6 163 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 SRSF8Q9BRL6 282 aaKnown RBP8.99□□□□□ -0.97
CTCFL-202ENST00000371196 KLK15Q9H2R5 256 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 ASPMQ8IZT6 3477 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 IGHV1-3A0A0C4DH29 117 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 RHODO00212 210 aa8.99□□□□□ -0.97
CTCFL-202ENST00000371196 RPL7P18124 248 aaKnown RBP8.99□□□□□ -0.97
CTCFL-202ENST00000371196 ZNF474Q6S9Z5 364 aaPredicted RBP8.99□□□□□ -0.97
CTCFL-202ENST00000371196 IGHG4P01861 327 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 ROS1P08922 2347 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 LOXP28300 417 aaPredicted RBP8.98□□□□□ -0.97
CTCFL-202ENST00000371196 DLX1P56177 255 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 ZNF672Q499Z4 452 aaPredicted RBP8.98□□□□□ -0.97
CTCFL-202ENST00000371196 NDUFA11Q86Y39 141 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 ZGRF1Q86YA3 2104 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 SCGB3A1Q96QR1 104 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 HERV-K104P63124 156 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 PRB3Q04118 309 aaPredicted RBP8.98□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE2BQ13066 116 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE2EQ4V326 116 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 TMEM155Q4W5P6 130 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 GFRALQ6UXV0 394 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 IL17RELQ6ZVW7 336 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 RAB1BQ9H0U4 201 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE2DQ9UEU5 116 aa8.98□□□□□ -0.97
CTCFL-202ENST00000371196 TGFAP01135 160 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 ERCC8Q13216 396 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 NEXN-AS1Q8NBZ9 246 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 CFHR4Q92496 578 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE12JA6NER3 117 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE7O76087 117 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE12FP0CL80 117 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE12GP0CL81 117 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE12IP0CL82 117 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 SLC25A16P16260 332 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 NDUFV3P56181 108 aaKnown RBP8.97□□□□□ -0.97
CTCFL-202ENST00000371196 GAGE4Q13068 117 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 C3orf36Q3SXR2 165 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 SEM1Q6ZVN7 128 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 CCL17Q92583 94 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 AJUBAQ96IF1 538 aa8.97□□□□□ -0.97
CTCFL-202ENST00000371196 IGKV3D-20A0A0C4DH25 116 aa8.96□□□□□ -0.97
CTCFL-202ENST00000371196 TMEM178BH3BS89 294 aa8.96□□□□□ -0.97
CTCFL-202ENST00000371196 SCGB1C2P0DMR2 95 aa8.96□□□□□ -0.97
CTCFL-202ENST00000371196 DYNAPQ8N1N2 210 aa8.96□□□□□ -0.97
CTCFL-202ENST00000371196 PRTN3P24158 256 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 SMAD5-AS1Q9Y6J3 95 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 MAP1BP46821 2468 aaKnown RBP8.96□□□□□ -0.98
CTCFL-202ENST00000371196 C17orf100A8MU93 164 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 CCDC179H3BU77 68 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 SNCGO76070 127 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 COX6B1P14854 86 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 KLHL30-AS1Q8NEE0 82 aa8.96□□□□□ -0.98
CTCFL-202ENST00000371196 TOMM6Q96B49 74 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms