RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ERCC8Q13216 396 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 KIAA1644Q3SXP7 199 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 SP6Q3SY56 376 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 KHDC3LQ587J8 217 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 LCE2CQ5TA81 110 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 RPL7L1Q6DKI1 246 aaKnown RBP2.87□□□□□ -1.95
MCF2-203ENST00000370576 TAF15Q92804 592 aaKnown RBP eCLIP2.87□□□□□ -1.95
MCF2-203ENST00000370576 RBMXL1Q96E39 390 aaKnown RBP2.87□□□□□ -1.95
MCF2-203ENST00000370576 CCL13Q99616 98 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 GGTLC1Q9BX51 225 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 CLEC7AQ9BXN2 247 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 E7EUB6 86 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 HRASP01112 189 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 TSHBP01222 138 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 SRP19P09132 144 aaKnown RBP2.87□□□□□ -1.95
MCF2-203ENST00000370576 TDRG1Q3Y452 100 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 DYNAPQ8N1N2 210 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 Q8N9W7 124 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 VSTM2AQ8TAG5 236 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 DCANP1Q8TF63 244 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 NPCDR1Q9BY65 106 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 KNTC1P50748 2209 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 URB1O60287 2271 aaKnown RBP2.87□□□□□ -1.95
MCF2-203ENST00000370576 CELSR1Q9NYQ6 3014 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 C9JCJ5 164 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 NDUFB3O43676 98 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 TFF1P04155 84 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 ZNF138P52744 262 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 WT1-ASQ06250 92 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 TTC32Q5I0X7 151 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 RASL11AQ6T310 242 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 ZNF493Q6ZR52 646 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 POM121L12Q8N7R1 296 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 MRPL20Q9BYC9 149 aaKnown RBP2.87□□□□□ -1.95
MCF2-203ENST00000370576 OTORQ9NRC9 128 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 F11RQ9Y624 299 aaKnown RBP2.87□□□□□ -1.95
MCF2-203ENST00000370576 MED12Q93074 2177 aa2.87□□□□□ -1.95
MCF2-203ENST00000370576 MAST4O15021 2626 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 HELZ2Q9BYK8 2649 aaKnown RBP2.86□□□□□ -1.95
MCF2-203ENST00000370576 SPTBN2O15020 2390 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 TRAV9-1A0A075B6T8 112 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 IGHV3OR15-7A0A075B7D8 119 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 TRAV3A0A0B4J244 114 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 DNAJC9-AS1A6NH13 148 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 F6UB75 175 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 H3BSH0 61 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 SAA1P0DJI8 122 aaPredicted RBP2.86□□□□□ -1.95
MCF2-203ENST00000370576 CT45A10P0DMU9 189 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 BCL2P10415 239 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 RPL39P5Q59GN2 51 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 C5orf56Q8N8D9 126 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 OR8B3Q8NGG8 313 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 FXYD5Q96DB9 178 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 OR8B2Q96RD0 313 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 CACNG5Q9UF02 275 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 DNAJC13O75165 2243 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 GOLGA4Q13439 2230 aaKnown RBP2.86□□□□□ -1.95
MCF2-203ENST00000370576 TRAV5A0A0B4J249 113 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 KANTRA0A1W2PQU2 76 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 PGPA6NDG6 321 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 B4DEV8 164 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 GGTLC3B5MD39 225 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 K7EIM0 57 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 IGLV2-8P01709 118 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 PRB1P04280 392 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 PI3P19957 117 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 CACNG7P62955 275 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 LCN12Q6JVE5 192 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 RPP25LQ8N5L8 163 aaKnown RBP2.86□□□□□ -1.95
MCF2-203ENST00000370576 OR10D4PQ8NGN7 298 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 LINC01560Q8TB33 94 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 SOCS3O14543 225 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 APOMO95445 188 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 Q0VG73 95 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 COA6Q5JTJ3 125 aaKnown RBP2.86□□□□□ -1.95
MCF2-203ENST00000370576 Q6AWC8 147 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 PATE2Q6UY27 113 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 MRPL55Q7Z7F7 128 aaKnown RBP2.86□□□□□ -1.95
MCF2-203ENST00000370576 ZNF695Q8IW36 515 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 MANBALQ9NQG1 85 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 CYSLTR1Q9Y271 337 aa2.86□□□□□ -1.95
MCF2-203ENST00000370576 TRAV2A0A0B4J234 112 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 IGLC2P0DOY2 106 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 PSMB3P49720 205 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 DAD1P61803 113 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 SRSF3P84103 164 aaKnown RBP2.85□□□□□ -1.95
MCF2-203ENST00000370576 RTL8BQ17RB0 113 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 ABCA11PQ4W5N1 156 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 EIF5AL1Q6IS14 154 aaKnown RBP2.85□□□□□ -1.95
MCF2-203ENST00000370576 C18orf65Q6ZTR6 163 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 PHF5AQ7RTV0 110 aaKnown RBP2.85□□□□□ -1.95
MCF2-203ENST00000370576 LINC00476Q8WZB0 136 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 MIEN1Q9BRT3 115 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 SLC25A2Q9BXI2 301 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 SMIM3Q9BZL3 60 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 ZNRD1Q9P1U0 126 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 CHD8Q9HCK8 2581 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 FBN3Q75N90 2809 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 DSPP15924 2871 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms