RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 A0A1B0GV72 72 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 A0A1W2PRS3 328 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 A6NN06 94 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 E7EQ34 232 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 PGRMC1O00264 195 aaKnown RBP0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 SAA1P0DJI8 122 aaPredicted RBP0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 SNRPD3P62318 126 aaKnown RBP0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 IZUMO2Q6UXV1 221 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 TMEM229BQ8NBD8 167 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 BRK1Q8WUW1 75 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 LINC00208Q96KT6 92 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 CCDC115Q96NT0 180 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 LXNQ9BS40 222 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 COMMD3Q9UBI1 195 aa0.34□□□□□ -2.36
ECHDC1-201ENST00000368287 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 CDC42EP2O14613 210 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 IFNA21P01568 189 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 BLCAPP62952 87 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 TMEM128Q5BJH2 165 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 MPC1Q9Y5U8 109 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 V9GYQ6 96 aa0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-201ENST00000368287 TNCP24821 2201 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 NBDYA0A0U1RRE5 68 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 LOC101927531A0A1B0GV80 90 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 LOC107986453A0A1B0GWG9 222 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 A0A1W2PPB8 328 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 KIR3DP1A8MWS1 328 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 SULT1C4O75897 302 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 IGKCP01834 107 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 GLYATL3Q5SZD4 288 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 Q6ZS92 163 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 TCTEX1D1Q8N7M0 179 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 CENPHQ9H3R5 247 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 NAV2Q8IVL1 2488 aa0.32□□□□□ -2.36
ECHDC1-201ENST00000368287 AFDNP55196 1824 aaKnown RBP0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 BBIP1A8MTZ0 92 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 NEFHP12036 1026 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 KDELR1P24390 212 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 CAV3P56539 151 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 SPINK7P58062 85 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 FXYD3Q14802 87 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 ZNF56Q15929 161 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 SAMD13Q5VXD3 122 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 XAF1Q6GPH4 301 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 NAT14Q8WUY8 206 aa0.31□□□□□ -2.36
ECHDC1-201ENST00000368287 HELZP42694 1942 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 A2MP01023 1474 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 ARL5CA6NH57 179 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 EDF1O60869 148 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 PFDN1O60925 122 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 FAM107AO95990 144 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 HBDP02042 147 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 GYPBP06028 91 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 GTF2A1P52655 376 aaPredicted RBP0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 TFAMQ00059 246 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 C3orf62Q6ZUJ4 267 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 C5orf56Q8N8D9 126 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 OR9Q1Q8NGQ5 310 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 AP1S3Q96PC3 154 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 PLAC8Q9NZF1 115 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 MRPL36Q9P0J6 103 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 NDUFAF1Q9Y375 327 aa0.3□□□□□ -2.36
ECHDC1-201ENST00000368287 ESPL1Q14674 2120 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 FAT4Q6V0I7 4981 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 PRORSD1PA6NEY8 169 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 SLC25A5P05141 298 aaKnown RBP0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 IL7P13232 177 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 RPL22P35268 128 aaKnown RBP0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 DNAJB13P59910 316 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 ASB16-AS1Q495Z4 193 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 LYPD5Q6UWN5 251 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 TOMM20LQ6UXN7 152 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 OTOSQ8NHW6 89 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 DDA1Q9BW61 102 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 ABCA1O95477 2261 aa0.29□□□□□ -2.36
ECHDC1-201ENST00000368287 BDP1A6H8Y1 2624 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 TMEM30CPA0ZSE6 113 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 TMEM189A5PLL7 270 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 TCRAP04437 139 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 EVI2AP22794 236 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 S100GP29377 79 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 SRP9P49458 86 aaKnown RBP0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 Q5XG85 94 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 C10orf99Q6UWK7 81 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 OR5A2Q8NGI9 324 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 SELENOSQ9BQE4 189 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 JPT1Q9UK76 154 aa0.28□□□□□ -2.36
ECHDC1-201ENST00000368287 LRP5O75197 1615 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 KIDINS220Q9ULH0 1771 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 IGF2P01344 180 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 IQCJQ1A5X6 159 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 SMIM15Q7Z3B0 74 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 DEFB132Q7Z7B7 95 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 TMEM35BQ8NCS4 154 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 OR8J3Q8NGG0 315 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 SMIM7Q9BQ49 75 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 MRPL35Q9NZE8 188 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms