RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TMEM183AQ8IXX5 376 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 YIPF6Q96EC8 236 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 PRRT1Q99946 306 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 EXTL2Q9UBQ6 330 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 RAB26Q9ULW5 256 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 GOSR2O14653 212 aa9.34□□□□□ -0.91
VAMP4-202ENST00000367740 FFAR4Q5NUL3 377 aa9.34□□□□□ -0.91
VAMP4-202ENST00000367740 C10orf113Q5VZT2 155 aa9.34□□□□□ -0.91
VAMP4-202ENST00000367740 NPVFQ9HCQ7 196 aa9.34□□□□□ -0.91
VAMP4-202ENST00000367740 ZNF492Q9P255 531 aa9.34□□□□□ -0.91
VAMP4-202ENST00000367740 TRBV19A0A075B6N1 114 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 AGPAT2O15120 278 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 NDUFB4O95168 129 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 AKAIN1P0CW23 69 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 KRTAP10-8P60410 259 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 UBE2MP61081 183 aaKnown RBP9.33□□□□□ -0.92
VAMP4-202ENST00000367740 SSBP1Q04837 148 aaKnown RBP9.33□□□□□ -0.92
VAMP4-202ENST00000367740 RHOHQ15669 191 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 BAK1Q16611 211 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 VWC2Q2TAL6 325 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 TMEM78Q5T7P6 136 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 RAB2BQ8WUD1 216 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 PRADC1Q9BSG0 188 aa9.33□□□□□ -0.92
VAMP4-202ENST00000367740 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
VAMP4-202ENST00000367740 FNDC10F2Z333 226 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 M0R2P5 195 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 C14orf177Q52M58 125 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 CLVS1Q8IUQ0 354 aaPredicted RBP9.32□□□□□ -0.92
VAMP4-202ENST00000367740 EXOC3-AS1Q8N2X6 119 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 Q8TAT8 98 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 VCX3BQ9H321 246 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 PRELID1Q9Y255 219 aa9.32□□□□□ -0.92
VAMP4-202ENST00000367740 PIGBOS1A0A0B4J2F0 54 aa9.31□□□□□ -0.92
VAMP4-202ENST00000367740 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
VAMP4-202ENST00000367740 NCS1P62166 190 aa9.31□□□□□ -0.92
VAMP4-202ENST00000367740 POLR2GP62487 172 aaKnown RBP eCLIP9.31□□□□□ -0.92
VAMP4-202ENST00000367740 CCDC59Q9P031 241 aaKnown RBP9.31□□□□□ -0.92
VAMP4-202ENST00000367740 RABL2BQ9UNT1 228 aa9.31□□□□□ -0.92
VAMP4-202ENST00000367740 ANKRD65E5RJM6 399 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 OR10J4P0C629 311 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 HIST1H1EP10412 219 aaKnown RBP9.3□□□□□ -0.92
VAMP4-202ENST00000367740 ZNF266Q14584 549 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 ATRAIDQ6UW56 229 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 C15orf40Q8WUR7 153 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 MGST2Q99735 147 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 SOSTQ9BQB4 213 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 PSENENQ9NZ42 101 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 MGAT4CQ9UBM8 478 aa9.3□□□□□ -0.92
VAMP4-202ENST00000367740 METTL15P1P0C7V9 234 aa9.29□□□□□ -0.92
VAMP4-202ENST00000367740 ZNF138P52744 262 aa9.29□□□□□ -0.92
VAMP4-202ENST00000367740 Q6AWC8 147 aa9.29□□□□□ -0.92
VAMP4-202ENST00000367740 FAM159AQ6UWV7 190 aa9.29□□□□□ -0.92
VAMP4-202ENST00000367740 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
VAMP4-202ENST00000367740 SMIM4Q8WVI0 70 aa9.29□□□□□ -0.92
VAMP4-202ENST00000367740 SCGB3A2Q96PL1 93 aa9.29□□□□□ -0.92
VAMP4-202ENST00000367740 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 A0A0U1RQV1 116 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 VAMP1P23763 118 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 PDE6HQ13956 83 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
VAMP4-202ENST00000367740 MZT2AQ6P582 158 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 TMEM14EPQ6UXP3 125 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 OR51M1Q9H341 326 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 SCP2D1Q9UJQ7 156 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
VAMP4-202ENST00000367740 IGHV3-73A0A0B4J1V6 119 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 C5orf51A6NDU8 294 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 VBP1P61758 197 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 MRPS10P82664 201 aaKnown RBP9.27□□□□□ -0.93
VAMP4-202ENST00000367740 ID3Q02535 119 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 CFAP126Q5VTH2 177 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 WDR73Q6P4I2 378 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 SDIM1Q6ZPB5 146 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 NIT1Q86X76 327 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 ZC2HC1AQ96GY0 325 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 C2orf50Q96LR7 162 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
VAMP4-202ENST00000367740 PHOX2AO14813 284 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 GNRH2O43555 120 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 SSSCA1O60232 199 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 PRSS1P07477 247 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 HOXB5P09067 269 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 PYYP10082 97 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 ARL16Q0P5N6 197 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 RAB31Q13636 194 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 DPPA3Q6W0C5 159 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 AAMDCQ9H7C9 122 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 TMEM14CQ9P0S9 112 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 NAGKQ9UJ70 344 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 KIF25-AS1Q9Y6Z4 181 aa9.26□□□□□ -0.93
VAMP4-202ENST00000367740 ANKRD20A5PA0PJZ0 165 aa9.25□□□□□ -0.93
VAMP4-202ENST00000367740 USP17L23D6RBM5 183 aa9.25□□□□□ -0.93
VAMP4-202ENST00000367740 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
VAMP4-202ENST00000367740 DGAT2L7PQ6IED9 249 aa9.25□□□□□ -0.93
VAMP4-202ENST00000367740 SMIM8Q96KF7 97 aa9.25□□□□□ -0.93
VAMP4-202ENST00000367740 SH3BGRL3Q9H299 93 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms