RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 C1orf43Q9BWL3 253 aa9.77□□□□□ -0.84
SHPRH-202ENST00000367503 TTTY13Q9BZ97 58 aa9.77□□□□□ -0.84
SHPRH-202ENST00000367503 WDR86Q86TI4 376 aa9.77□□□□□ -0.85
SHPRH-202ENST00000367503 PCNX1Q96RV3 2341 aa9.77□□□□□ -0.85
SHPRH-202ENST00000367503 C3orf36Q3SXR2 165 aa9.77□□□□□ -0.85
SHPRH-202ENST00000367503 PRSS22Q9GZN4 317 aa9.77□□□□□ -0.85
SHPRH-202ENST00000367503 USF3Q68DE3 2245 aa9.77□□□□□ -0.85
SHPRH-202ENST00000367503 SRRM4A7MD48 611 aaKnown RBP9.77□□□□□ -0.85
SHPRH-202ENST00000367503 PAX4O43316 350 aa9.77□□□□□ -0.85
SHPRH-202ENST00000367503 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 Q6ZS92 163 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 TP53TG3Q9ULZ0 132 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 HELZP42694 1942 aaKnown RBP9.76□□□□□ -0.85
SHPRH-202ENST00000367503 Q6ZR03 302 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
SHPRH-202ENST00000367503 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.76□□□□□ -0.858e-7■■■□□ 18.9
SHPRH-202ENST00000367503 A0A087WWL8 130 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 FAM236AA0A1B0GUQ0 79 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 FAM236BA0A1B0GV22 79 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 MT-ATP8P03928 68 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 Q8TCH9 128 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 ABCA4P78363 2273 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 WT1-ASQ06250 92 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 ANAPC1Q9H1A4 1944 aa9.76□□□□□ -0.85
SHPRH-202ENST00000367503 C15orf65H3BRN8 121 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 K7EM74 188 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 LYPD2Q6UXB3 125 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 ZNF833PQ6ZTB9 187 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 C3orf56Q8N813 242 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 ZNRD1Q9P1U0 126 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 TP73-AS1Q9UF72 201 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 H3BRN7 92 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
SHPRH-202ENST00000367503 VWC2LB2RUY7 222 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 LINC00311Q8N616 119 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 A0A0G2JNJ9 132 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 Q6ZSR3 168 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 Q9UFV3 132 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 CR1LQ2VPA4 569 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 LINC00527Q9UJ94 153 aa9.74□□□□□ -0.85
SHPRH-202ENST00000367503 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 NDUFV3P56181 108 aaKnown RBP9.73□□□□□ -0.85
SHPRH-202ENST00000367503 MRPL23Q16540 153 aaKnown RBP9.73□□□□□ -0.85
SHPRH-202ENST00000367503 ODF3L1Q8IXM7 274 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 ZNF503-AS2A6NEH8 195 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 ZNF134P52741 427 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 USMG5Q96IX5 58 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 MED13LQ71F56 2210 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
SHPRH-202ENST00000367503 PTH2Q96A98 100 aa9.73□□□□□ -0.85
SHPRH-202ENST00000367503 LY6G6EA0A0G2JKS1 128 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 LINC01620Q4KN68 170 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 PHLDA1Q8WV24 401 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-202ENST00000367503 U3KQA8 63 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 RBMY1FQ15415 496 aaKnown RBP9.72□□□□□ -0.85
SHPRH-202ENST00000367503 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 RNF138Q8WVD3 245 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-202ENST00000367503 ATOX1O00244 68 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 NDPQ00604 133 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 STHQ8IWL8 128 aa9.72□□□□□ -0.85
SHPRH-202ENST00000367503 COL4A6Q14031 1691 aa9.71□□□□□ -0.85
SHPRH-202ENST00000367503 SDHAF1A6NFY7 115 aa9.71□□□□□ -0.85
SHPRH-202ENST00000367503 UBL5Q9BZL1 73 aa9.71□□□□□ -0.85
SHPRH-202ENST00000367503 YLPM1P49750 1951 aaKnown RBP9.71□□□□□ -0.85
SHPRH-202ENST00000367503 PF4P02776 101 aa9.71□□□□□ -0.86
SHPRH-202ENST00000367503 IGLV1-44P01699 117 aa9.71□□□□□ -0.86
SHPRH-202ENST00000367503 FAM223BA6NKX1 122 aa9.7□□□□□ -0.86
SHPRH-202ENST00000367503 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-202ENST00000367503 FAM223AQ8IWN6 122 aa9.7□□□□□ -0.86
SHPRH-202ENST00000367503 MALRD1Q5VYJ5 2156 aa9.7□□□□□ -0.86
SHPRH-202ENST00000367503 E9PLD3 99 aa9.7□□□□□ -0.86
SHPRH-202ENST00000367503 RS1O15537 224 aa9.7□□□□□ -0.86
SHPRH-202ENST00000367503 GATA1P15976 413 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-202ENST00000367503 COL8A2P25067 703 aa9.7□□□□□ -0.86
SHPRH-202ENST00000367503 TMEM219Q86XT9 240 aa9.7□□□□□ -0.86
SHPRH-202ENST00000367503 C5orf47Q569G3 176 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 TEX36Q5VZQ5 186 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 NOTCH4Q99466 2003 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 IGLV3-9A0A075B6K5 115 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 E7EQL1 145 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 ODF1Q14990 250 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 A0A1B0GXF2 115 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 SVIPQ8NHG7 77 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 FAM167A-AS1Q96KT0 104 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 A4D1N5 150 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 RBM3P98179 157 aaKnown RBP9.69□□□□□ -0.86
SHPRH-202ENST00000367503 C17orf77Q96MU5 243 aa9.69□□□□□ -0.86
SHPRH-202ENST00000367503 TNRC6AQ8NDV7 1962 aaKnown RBP9.69□□□□□ -0.86
SHPRH-202ENST00000367503 I3L3M4 83 aa9.68□□□□□ -0.86
SHPRH-202ENST00000367503 FAM110DQ8TAY7 271 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-202ENST00000367503 JPT2Q9H910 190 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms