RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CCDC168Q8NDH2 2452 aa6.99□□□□□ -1.29
SYNE1-206ENST00000367253 K7ERJ3 54 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 LYPD6Q86Y78 171 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 CEND1Q8N111 149 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 IGHV1-8P0DP01 117 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 KLF5Q13887 457 aaPredicted RBP6.98□□□□□ -1.29
SYNE1-206ENST00000367253 ANAPC1Q9H1A4 1944 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 IGKV2D-24A0A075B6R9 120 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 INAFM1C9JVW0 142 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 C20orf197Q8N268 126 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 NYNRINQ9P2P1 1898 aaKnown RBP6.98□□□□□ -1.29
SYNE1-206ENST00000367253 C15orf32Q32M92 178 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 NDUFA11Q86Y39 141 aa6.98□□□□□ -1.29
SYNE1-206ENST00000367253 H3BUA1 57 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 LEPROTO15243 131 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 C6orf226Q5I0X4 101 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 RASL10AQ92737 203 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 YPEL1O60688 119 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 YPEL2Q96QA6 119 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 MESP1Q9BRJ9 268 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 RTBDNQ9BSG5 229 aaPredicted RBP6.97□□□□□ -1.29
SYNE1-206ENST00000367253 C1QTNF5Q9BXJ0 243 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 ESM1Q9NQ30 184 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 TMEM14BQ9NUH8 114 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 VCYO14598 125 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 CD55P08174 381 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 FREM3P0C091 2139 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 FAM201AQ5SY85 155 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 SUMO4Q6EEV6 95 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 C3orf22Q8N5N4 141 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 LEAP2Q969E1 77 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 GOLGB1Q14789 3259 aaKnown RBP6.97□□□□□ -1.29
SYNE1-206ENST00000367253 NEGR1Q7Z3B1 354 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 TEN1Q86WV5 123 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 VOPP1Q96AW1 172 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 ICOSQ9Y6W8 199 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 LTBP2Q14767 1821 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 TRAV3A0A0B4J244 114 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 LOC107984640A0A0U1RRK4 108 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 IGLL5B9A064 214 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 TCRAP04437 139 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 RHPN1-AS1Q9BWJ2 59 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 SIGLEC9Q9Y336 463 aa6.97□□□□□ -1.29
SYNE1-206ENST00000367253 SMIM10L1P0DMW3 83 aa6.96□□□□□ -1.29
SYNE1-206ENST00000367253 SMIM10Q96HG1 83 aa6.96□□□□□ -1.29
SYNE1-206ENST00000367253 SONP18583 2426 aaKnown RBP6.96□□□□□ -1.3
SYNE1-206ENST00000367253 MYMXA0A1B0GTQ4 84 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 C12orf77C9JDV5 145 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 INS-IGF2F8WCM5 200 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 ADCYAP1P18509 176 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 ZCCHC24Q8N2G6 241 aaKnown RBP6.96□□□□□ -1.3
SYNE1-206ENST00000367253 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 LHFPL6Q9Y693 200 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 GPR179Q6PRD1 2367 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 TRBV19A0A075B6N1 114 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 LY6G6CO95867 125 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 COL8A2P25067 703 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 RFNGQ9Y644 331 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 MED13LQ71F56 2210 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 TRAV1-1A0A0B4J248 108 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 IGFBP3P17936 291 aaPredicted RBP6.96□□□□□ -1.3
SYNE1-206ENST00000367253 IL15RAQ13261 267 aa6.96□□□□□ -1.3
SYNE1-206ENST00000367253 ANKRD36A6QL64 1941 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 NOTCH4Q99466 2003 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 IGLV3-32A0A0A0MS00 114 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 TM2D1Q9BX74 207 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 BDP1A6H8Y1 2624 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 CACNA1AO00555 2505 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 RPL39P5Q59GN2 51 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 LAIR2Q6ISS4 152 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 C17orf82Q86X59 251 aaPredicted RBP6.95□□□□□ -1.3
SYNE1-206ENST00000367253 DSCR8Q96T75 97 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 LINC01548A6NM66 108 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 C17orf98A8MV24 154 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 DEFB112Q30KQ8 113 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 DEPPQ9NTK1 212 aa6.95□□□□□ -1.3
SYNE1-206ENST00000367253 H0YIZ8 118 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 FOXE3Q13461 319 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 ARHGEF17Q96PE2 2063 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-206ENST00000367253 LYPD3O95274 346 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 TDRD6O60522 2096 aaKnown RBP6.94□□□□□ -1.3
SYNE1-206ENST00000367253 DOCK11Q5JSL3 2073 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 IGKV1OR2-108A0A075B7D4 117 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 SRRM5B3KS81 715 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 OVOL3O00110 214 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 GATA1P15976 413 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-206ENST00000367253 ERCC8Q13216 396 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 C11orf45Q8TAV5 145 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 ZFC3H1O60293 1989 aaKnown RBP6.94□□□□□ -1.3
SYNE1-206ENST00000367253 IGHV1-3A0A0C4DH29 117 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 A0A0G2JK05 382 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 A6NED7 52 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 SUPT4H1P63272 117 aaKnown RBP6.94□□□□□ -1.3
SYNE1-206ENST00000367253 LINC01590Q5TEZ4 76 aa6.94□□□□□ -1.3
SYNE1-206ENST00000367253 RUSC1-AS1Q66K80 236 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms