RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SPRR2AP35326 72 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 CDKN2CP42773 168 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 SPA17Q15506 151 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 C9orf16Q9BUW7 83 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 PKD1L2Q7Z442 2459 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 LAMC1P11047 1609 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 PKD1P98161 4303 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 DNAH1Q9P2D7 4330 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 NINQ8N4C6 2090 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 KIAA1549LQ6ZVL6 1849 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 APOBP04114 4563 aaKnown RBP-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 LYRM1O43325 122 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 C1QBP02746 253 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 MT1HL1P0DM35 61 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 CCL7P80098 99 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 LINC00269Q8N2A0 174 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 C5orf17Q8NAS9 161 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 OR2J1Q9GZK6 312 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 HTTP42858 3142 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 DNAH7Q8WXX0 4024 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 NCAPD3P42695 1498 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 CNOT1A5YKK6 2376 aaKnown RBP-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 VPS13DQ5THJ4 4388 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 CMYA5Q8N3K9 4069 aa-0.82□□□□□ -2.54
RNU4-28P-201ENST00000364739 DYNC1H1Q14204 4646 aaKnown RBP-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 TANC1Q9C0D5 1861 aa-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 A6NN06 94 aa-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 HIST1H2BKO60814 126 aa-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 TRGC2P03986 189 aa-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 HIST1H2BJP06899 126 aa-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 EVI2AP22794 236 aa-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 HSPE1P61604 102 aaKnown RBP-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 SLC22A13Q9Y226 551 aa-0.83□□□□□ -2.54
RNU4-28P-201ENST00000364739 CEP295Q9C0D2 2601 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 CHD7Q9P2D1 2997 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 IGHV3-30P01768 117 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 IGHV3-30-5P0DP03 117 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 FAM216BQ8N7L0 139 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 MYH2Q9UKX2 1941 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 GVINP1Q7Z2Y8 2422 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 SMG1Q96Q15 3661 aaKnown RBP-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 PIK3C2AO00443 1686 aa-0.84□□□□□ -2.54
RNU4-28P-201ENST00000364739 DSPPQ9NZW4 1301 aa-0.85□□□□□ -2.54
RNU4-28P-201ENST00000364739 CFAP46Q8IYW2 2715 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 FXYD1O00168 92 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 SERPINA1P01009 418 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 CST2P09228 141 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 FXYD3Q14802 87 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 VMO1Q7Z5L0 202 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 BOD1L1Q8NFC6 3051 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 NBEAQ8NFP9 2946 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 GPX7Q96SL4 187 aaPredicted RBP-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 SPENQ96T58 3664 aaKnown RBP-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 ZZEF1O43149 2961 aa-0.85□□□□□ -2.55
RNU4-28P-201ENST00000364739 KALRNO60229 2985 aa-0.86□□□□□ -2.55
RNU4-28P-201ENST00000364739 AKAP9Q99996 3911 aa-0.86□□□□□ -2.55
RNU4-28P-201ENST00000364739 RELNP78509 3460 aa-0.86□□□□□ -2.55
RNU4-28P-201ENST00000364739 PIAS1O75925 651 aa-0.86□□□□□ -2.55
RNU4-28P-201ENST00000364739 PRM1P04553 51 aa-0.86□□□□□ -2.55
RNU4-28P-201ENST00000364739 FAM213BQ8TBF2 198 aa-0.86□□□□□ -2.55
RNU4-28P-201ENST00000364739 SACSQ9NZJ4 4579 aa-0.86□□□□□ -2.55
RNU4-28P-201ENST00000364739 CD109Q6YHK3 1445 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 FAM186AA6NE01 2351 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 LOC107984156A0A0G2JMH3 177 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 NDUFC2O95298 119 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 GNG5P63218 68 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 CSAG1Q6PB30 78 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 ARL17AQ8IVW1 177 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 SPRR2FQ96RM1 72 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 PAIP2Q9BPZ3 127 aaKnown RBP-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 MYO9AB2RTY4 2548 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 VPS13BQ7Z7G8 4022 aa-0.87□□□□□ -2.55
RNU4-28P-201ENST00000364739 DNAH5Q8TE73 4624 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 ACACAQ13085 2346 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 NBDYA0A0U1RRE5 68 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 IFNA14P01570 189 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 MT1BP07438 61 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 ERVS71-1P61550 626 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 SNRPD3P62318 126 aaKnown RBP-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 SNCBQ16143 134 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 DGCR14Q96DF8 476 aaKnown RBP-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 TANC2Q9HCD6 1990 aa-0.88□□□□□ -2.55
RNU4-28P-201ENST00000364739 CSMD1Q96PZ7 3565 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 TLN1Q9Y490 2541 aaKnown RBP-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 LOC101927531A0A1B0GV80 90 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 PHBP35232 272 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 HBBP68871 147 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 POU6F1Q14863 301 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 AKIRIN2Q53H80 203 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 C5orf56Q8N8D9 126 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 OR4C12Q96R67 309 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 EFCAB11Q9BUY7 163 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 ARMC1Q9NVT9 282 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 TPRKBQ9Y3C4 175 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 ADGRG4Q8IZF6 3080 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 ZFHX4Q86UP3 3567 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 UHRF1BP1Q6BDS2 1440 aa-0.89□□□□□ -2.55
RNU4-28P-201ENST00000364739 USP54Q70EL1 1684 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 TRAV5A0A0B4J249 113 aa-0.9□□□□□ -2.55
RNU4-28P-201ENST00000364739 G3V2T6 193 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms