RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 A0A087X0K7 114 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 H7BYZ3 331 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 ZNF701M0R085 212 aaPredicted RBP3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 MRPS12O15235 138 aaKnown RBP3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 SSSCA1O60232 199 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 METTL15P1P0C7V9 234 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 M6PRP20645 277 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 AP3S2P59780 193 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 PLP1P60201 277 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 ESRGQ1W209 222 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 TTC32Q5I0X7 151 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 PATE2Q6UY27 113 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 ZNF493Q6ZR52 646 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 TOMM5Q8N4H5 51 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 OR10J6PQ8NGY7 276 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 RXFP4Q8TDU9 374 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 RAB2BQ8WUD1 216 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 ARV1Q9H2C2 271 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 Q9H3A6 140 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 PSENENQ9NZ42 101 aa3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
RNU4-4P-201ENST00000364588 TRAV12-3A0A0B4J271 114 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 LINC00854A0A1B0GVQ3 168 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 C9orf170A2RU37 121 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 SNURFLB1AK76 121 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 H3BMQ9 156 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 SLC17A3O00476 420 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 GOSR2O14653 212 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 NOL3O60936 208 aaKnown RBP3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 RLN2P04090 185 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 GATA1P15976 413 aaPredicted RBP3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 TMBIM6P55061 237 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 LINC00315P59091 139 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 SELENOTP62341 195 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 LCN15Q6UWW0 184 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 Q6ZTI0 123 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 LINC00305Q7Z4B0 112 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 LINC00612Q8N6U2 182 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 SLC25A21Q9BQT8 299 aaPredicted RBP3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 ZNF331Q9NQX6 463 aaPredicted RBP3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 FLVCR2Q9UPI3 526 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 V9GYH0 126 aa3.53□□□□□ -1.84
RNU4-4P-201ENST00000364588 A0A096LPF7 62 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 A0A1W2PPQ1 181 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 EPM2AB3EWF7 344 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 H3BQ15 152 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 AGPAT2O15120 278 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 COX7A2P2O60397 106 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 CT45A10P0DMU9 189 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 CXCL2P19875 107 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 OPCMLQ14982 345 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 TMEM14EPQ6UXP3 125 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 S100A7AQ86SG5 101 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 ZNF546Q86UE3 836 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 BPIFA4PQ86YQ2 179 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 OR10P1Q8NGE3 313 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 ZNF431Q8TF32 576 aaPredicted RBP3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 TMEM37Q8WXS4 190 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 VSIG2Q96IQ7 327 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 SMIM8Q96KF7 97 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 BCL7BQ9BQE9 202 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 C20orf144Q9BQM9 153 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 SLC50A1Q9BRV3 221 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 UPK3BQ9BT76 320 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 NPVFQ9HCQ7 196 aa3.52□□□□□ -1.85
RNU4-4P-201ENST00000364588 TRGV2A0A075B6R0 118 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 TRGV1A0A0A0MS02 117 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 TRAV5A0A0B4J249 113 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 FNDC10F2Z333 226 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 H3BNG1 76 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 K7EPK0 472 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 IGHV3-53P01767 116 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 IGLC2P0DOY2 106 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 LEPP41159 167 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 UBE2MP61081 183 aaKnown RBP3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 ZNF415Q09FC8 603 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 DAZ2Q13117 558 aaKnown RBP3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 ERCC8Q13216 396 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 BTN1A1Q13410 526 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 IAH1Q2TAA2 248 aaPredicted RBP3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 C10orf113Q5VZT2 155 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 MIC13Q5XKP0 118 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 Q6ZRN7 208 aaPredicted RBP3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 MGST2Q99735 147 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 GSN-AS1Q9NRJ2 163 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 GSKIPQ9P0R6 139 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 RNF24Q9Y225 148 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 RCL1Q9Y2P8 373 aaKnown RBP3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 PXMP4Q9Y6I8 212 aa3.51□□□□□ -1.85
RNU4-4P-201ENST00000364588 DNAH5Q8TE73 4624 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 C7orf66A4D0T2 115 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 C7orf71A4D174 169 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 CCDC160A6NGH7 325 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 M0R3E3 92 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 CCSO14618 274 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 SIVA1O15304 175 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 TSC22D2O75157 780 aa3.5□□□□□ -1.85
RNU4-4P-201ENST00000364588 NDUFB6O95139 128 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms