RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C10orf91Q5T1B1 145 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 ATOX1O00244 68 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 Q6ZVH6 145 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 SIGLEC9Q9Y336 463 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 PRB2P02812 416 aaPredicted RBP10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 A0A1B0GX51 115 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 IGLC7A0M8Q6 106 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 NDPQ00604 133 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 FAM104BQ5XKR9 115 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 C10orf55Q5SWW7 151 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 GAS1P54826 345 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 SPACA3Q8IXA5 215 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 CYYR1Q96J86 154 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 PRSS46E5RG02 174 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 NPYP01303 97 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 SMIM27A0A1W2PRY6 76 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 LINC01619G3V211 115 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 WFDC9Q8NEX5 89 aa10.69□□□□□ -0.7
SRGAP3-201ENST00000360413 FGFBP3Q8TAT2 258 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 PRSS29PA6NIE9 313 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 RHPN1-AS1Q9BWJ2 59 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 HLA-DRB4P13762 266 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 TMEM200BQ69YZ2 307 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 HLA-DRB4X5D2U9 266 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 ANKHD1Q8IWZ3 2542 aaKnown RBP10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 MRPL35Q9NZE8 188 aaKnown RBP10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 C15orf62A8K5M9 175 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 IGHV1-46P01743 117 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 MRPL51Q4U2R6 128 aaKnown RBP10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 RNASE8Q8TDE3 154 aaKnown RBP10.68□□□□□ -0.7
SRGAP3-201ENST00000360413 C8orf49Q96NF6 230 aa10.67□□□□□ -0.7
SRGAP3-201ENST00000360413 IGHV1-18A0A0C4DH31 117 aa10.67□□□□□ -0.7
SRGAP3-201ENST00000360413 IGFL4Q6B9Z1 124 aa10.67□□□□□ -0.7
SRGAP3-201ENST00000360413 TRAV26-1A0A087WT03 109 aa10.67□□□□□ -0.7
SRGAP3-201ENST00000360413 K7ERS5 55 aa10.67□□□□□ -0.7
SRGAP3-201ENST00000360413 ATP1A1-AS1Q5TC04 95 aa10.67□□□□□ -0.7
SRGAP3-201ENST00000360413 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
SRGAP3-201ENST00000360413 TRBV6-6A0A0A6YYG2 114 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 F8VRH5 84 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 IL15RAQ13261 267 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 F6UB75 175 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 BAALC-AS2P0C853 105 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 SIGLEC8Q9NYZ4 499 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 H0YJW9 148 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 BAALCQ8WXS3 180 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 ZNF492Q9P255 531 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 DEFB125Q8N687 156 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 IGKV1-12A0A0C4DH73 117 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 IGKV1D-12P01611 117 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 HERV-K104P63124 156 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 C11orf44Q8N8P7 122 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 TTC28Q96AY4 2481 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 DUX4L9Q6RFH8 374 aaPredicted RBP10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 TMEM219Q86XT9 240 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 SIP14410 1827 aa10.66□□□□□ -0.7
SRGAP3-201ENST00000360413 V9GYV3 84 aa10.65□□□□□ -0.7
SRGAP3-201ENST00000360413 ADAMTS9Q9P2N4 1935 aa10.65□□□□□ -0.7
SRGAP3-201ENST00000360413 FOXF2Q12947 444 aa10.65□□□□□ -0.7
SRGAP3-201ENST00000360413 KLF2Q9Y5W3 355 aaPredicted RBP10.65□□□□□ -0.7
SRGAP3-201ENST00000360413 TIAF1O95411 115 aa10.65□□□□□ -0.7
SRGAP3-201ENST00000360413 ORMDL1Q9P0S3 153 aa10.65□□□□□ -0.71
SRGAP3-201ENST00000360413 TNS1Q9HBL0 1735 aaKnown RBP10.65□□□□□ -0.71
SRGAP3-201ENST00000360413 TRAV26-2A0A0B4J265 109 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 KIR2DL5BA0A0G2JN68 375 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 KIR2DL5BA0A0G2JPC4 375 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 KIR2DL5AQ8N109 375 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 PRSS47A8MTI9 375 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 WIPF3A6NGB9 483 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 BDP1A6H8Y1 2624 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 IGKV1-27A0A075B6S5 117 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 FOXI2Q6ZQN5 318 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 MRPL55Q7Z7F7 128 aaKnown RBP10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 J3QQQ9 107 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 RHOHQ15669 191 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 CFHR4Q92496 578 aa10.64□□□□□ -0.71
SRGAP3-201ENST00000360413 UBE2E1P51965 193 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 UBE2E2Q96LR5 201 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 PNRC2Q9NPJ4 139 aaKnown RBP10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 LINC00473A8K010 186 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 MSMBP08118 114 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 SAA4P35542 130 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 LINC00527Q9UJ94 153 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
SRGAP3-201ENST00000360413 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 CFC1BP0CG36 223 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 CFC1P0CG37 223 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 Q6ZS49 121 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 C8orf86Q6ZUL3 223 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 MSRB2Q9Y3D2 182 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 A0A0B4J2C4 111 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 IGKV3D-7A0A0C4DH55 119 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 NDUFS7O75251 213 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 DKK1O94907 266 aa10.62□□□□□ -0.71
SRGAP3-201ENST00000360413 TGFBR3LH3BV60 316 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms