RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 LHFPL4Q7Z7J7 247 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 RPP25LQ8N5L8 163 aaKnown RBP7.8□□□□□ -1.16
CUX1-203ENST00000360264 OR11H6Q8NGC7 330 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 MRPL53Q96EL3 112 aaKnown RBP7.8□□□□□ -1.16
CUX1-203ENST00000360264 DKK4Q9UBT3 224 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 IGKV1-27A0A075B6S5 117 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 UBE2V1Q13404 147 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 GAGE12BA1L429 117 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 RNF152Q8N8N0 203 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 MST1P26927 711 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 SRSF3P84103 164 aaKnown RBP7.8□□□□□ -1.16
CUX1-203ENST00000360264 TAL2Q16559 108 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 KIAA1549LQ6ZVL6 1849 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 SMIM27A0A1W2PRY6 76 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 PAX9P55771 341 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 MST1LQ2TV78 715 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 LYL1P12980 280 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 C9JAW5 83 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 IGFL3Q6UXB1 125 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 J3QKU1 62 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 PPDPFLQ8WWR9 84 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 Q0VFX4 171 aa7.8□□□□□ -1.16
CUX1-203ENST00000360264 ZNF106Q9H2Y7 1883 aaKnown RBP7.79□□□□□ -1.16
CUX1-203ENST00000360264 K7EMI3 77 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 FOXL2NBQ6ZUU3 175 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 EFNA2O43921 213 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 OVOL3O00110 214 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 CRLF1O75462 422 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 TEX36Q5VZQ5 186 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 ATRQ13535 2644 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 SPINK8P0C7L1 97 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 FOXI2Q6ZQN5 318 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 VSIRQ9H7M9 311 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 TRAV3A0A0B4J244 114 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 DKK1O94907 266 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 NUP210LQ5VU65 1888 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 CFHR2P36980 270 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 ZNF833PQ6ZTB9 187 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 PRSS29PA6NIE9 313 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 RNF223E7ERA6 249 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 ATRAIDQ6UW56 229 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 TCTEX1D4Q5JR98 221 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 ZNF134P52741 427 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 Q0VG73 95 aa7.79□□□□□ -1.16
CUX1-203ENST00000360264 KLF5Q13887 457 aaPredicted RBP7.79□□□□□ -1.16
CUX1-203ENST00000360264 C17orf82Q86X59 251 aaPredicted RBP7.78□□□□□ -1.16
CUX1-203ENST00000360264 GAGE7O76087 117 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 GAGE12FP0CL80 117 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 GAGE12GP0CL81 117 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 GAGE12IP0CL82 117 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 H3BRN7 92 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 COL8A2P25067 703 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 LMO1P25800 156 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 NTF4P34130 210 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 HLA-DRB4P13762 266 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 LINC00311Q8N616 119 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 HLA-DRB4X5D2U9 266 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 TP53TG1Q9Y2A0 90 aa7.78□□□□□ -1.16
CUX1-203ENST00000360264 TRBV19A0A075B6N1 114 aa7.77□□□□□ -1.16
CUX1-203ENST00000360264 ARMS2P0C7Q2 107 aa7.77□□□□□ -1.16
CUX1-203ENST00000360264 BVES-AS1Q5T3Y7 98 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 DMRTC2Q8IXT2 367 aaPredicted RBP7.77□□□□□ -1.17
CUX1-203ENST00000360264 C20orf78Q9BR46 151 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 ZNF124Q15973 351 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 CLPSP04118 112 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 FAM231DQ6ZW35 169 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 C16orf74Q96GX8 76 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 FLNBO75369 2602 aaKnown RBP7.77□□□□□ -1.17
CUX1-203ENST00000360264 GFI1Q99684 422 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 PRSS47A8MTI9 375 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 CXCL1P09341 107 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 TMEM258P61165 79 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 PYGO2Q9BRQ0 406 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 GTSF1LQ9H1H1 148 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 VPREB3Q9UKI3 123 aa7.77□□□□□ -1.17
CUX1-203ENST00000360264 HERV-K104P63124 156 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 REG4Q9BYZ8 158 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 F8VRH5 84 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 PFN2P35080 140 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 LENEPQ9Y5L5 61 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 C8orf31Q8N9H6 132 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 COLCA2A8K830 154 aa7.76□□□□□ -1.17
CUX1-203ENST00000360264 SPINK13Q1W4C9 94 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 SDHAF1A6NFY7 115 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 ZNF503Q96F45 646 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 SMIM2Q9BVW6 85 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 NDUFS6O75380 124 aaKnown RBP7.75□□□□□ -1.17
CUX1-203ENST00000360264 C9orf66Q5T8R8 295 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 RBAKDNA6NC62 111 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 HAMPP81172 84 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 ANGP03950 147 aaKnown RBP7.75□□□□□ -1.17
CUX1-203ENST00000360264 B3GALT5-AS1P59052 145 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 XCL2Q9UBD3 114 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 HLA-DMBP28068 263 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 RUSC1-AS1Q66K80 236 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 LOC105371267A0A1B0GV96 52 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 FUSP35637 526 aaKnown RBP eCLIP7.75□□□□□ -1.175e-7■■■■□ 23.7
CUX1-203ENST00000360264 FOXG1P55316 489 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms