RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 IGF2BP2-AS1Q96M15 143 aa14.04□□□□□ -0.16
CACNA1A-201ENST00000360228 H0YIZ8 118 aa14.04□□□□□ -0.16
CACNA1A-201ENST00000360228 PSPNO60542 156 aa14.04□□□□□ -0.16
CACNA1A-201ENST00000360228 ID3Q02535 119 aa14.04□□□□□ -0.16
CACNA1A-201ENST00000360228 B4DSR2 109 aa14.03□□□□□ -0.16
CACNA1A-201ENST00000360228 RNASE13Q5GAN3 156 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-201ENST00000360228 POLR3KQ9Y2Y1 108 aaPredicted RBP14.03□□□□□ -0.16
CACNA1A-201ENST00000360228 ATP5G1P05496 136 aa14.03□□□□□ -0.16
CACNA1A-201ENST00000360228 TMEM178BH3BS89 294 aa14.02□□□□□ -0.16
CACNA1A-201ENST00000360228 NDUFA12Q9UI09 145 aa14.02□□□□□ -0.16
CACNA1A-201ENST00000360228 PDE6HQ13956 83 aa14.02□□□□□ -0.16
CACNA1A-201ENST00000360228 Q86TA4 180 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 FGFBP3Q8TAT2 258 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 TTC28Q96AY4 2481 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 LYL1P12980 280 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 XCL1P47992 114 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 RPP25LQ8N5L8 163 aaKnown RBP14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 LINC00479Q96M42 142 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 IGKV1-39P01597 117 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 IGKV1D-39P04432 117 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 Q0VG73 95 aa14.02□□□□□ -0.17
CACNA1A-201ENST00000360228 NTF4P34130 210 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 PRDM6Q9NQX0 595 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 C2orf66Q6UXQ4 117 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 ZMAT4Q9H898 229 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 SIGLEC9Q9Y336 463 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 MBD3L4A6NDZ8 208 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 MBD3L3A6NE82 208 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 MBD3L5A6NJ08 208 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 IGHV2-70P01814 119 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 MRPL14Q6P1L8 145 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 ZNRF2Q8NHG8 242 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 MBD3L2Q8NHZ7 208 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 TMEM213A2RRL7 107 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 BAALC-AS2P0C853 105 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 PRR15LQ9BU68 103 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 SIVA1O15304 175 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 IGKV2D-24A0A075B6R9 120 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 TIMM17AQ99595 171 aa14.01□□□□□ -0.17
CACNA1A-201ENST00000360228 IGLV3-21P80748 117 aaPredicted RBP14□□□□□ -0.17
CACNA1A-201ENST00000360228 LINC01356Q8N9X3 169 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 M0R1W7 72 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 IGKV1-9A0A0C4DH69 117 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 HGFACQ04756 655 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 SAA4P35542 130 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 A0A0B4J2C4 111 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 FAM240AA0A1B0GVK7 77 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 HERVK_113P63121 156 aa14□□□□□ -0.17
CACNA1A-201ENST00000360228 IGKV1D-8A0A087WSZ0 117 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 EFNA4P52798 201 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 FOXF2Q12947 444 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 CSRP2Q16527 193 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 PAX9P55771 341 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 MYO9AB2RTY4 2548 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 A0A087WV48 116 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 E9PLN8 166 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 PFN1P07737 140 aaKnown RBP13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 C20orf204Q6ZNR8 217 aa13.99□□□□□ -0.17
CACNA1A-201ENST00000360228 ZFP2Q6ZN57 461 aa13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 OVOL3O00110 214 aa13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 SP7Q8TDD2 431 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 COL18A1P39060 1754 aa13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 HS3ST6Q96QI5 342 aa13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 SDHAF1A6NFY7 115 aa13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 NPYP01303 97 aa13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 NMSQ5H8A3 153 aa13.98□□□□□ -0.17
CACNA1A-201ENST00000360228 PRSS46E5RG02 174 aa13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 Q8N8P6 123 aa13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 SRSF2Q01130 221 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 MRPL23Q16540 153 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 BUB3O43684 328 aa13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 Q9HAA7 133 aa13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 C4orf48Q5BLP8 95 aa13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 A0A1B0GUS0 222 aa13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 THSD7AQ9UPZ6 1657 aa13.97□□□□□ -0.17
CACNA1A-201ENST00000360228 GPR179Q6PRD1 2367 aa13.96□□□□□ -0.17
CACNA1A-201ENST00000360228 IGKV1OR2-108A0A075B7D4 117 aa13.96□□□□□ -0.17
CACNA1A-201ENST00000360228 CXCL5P42830 114 aa13.96□□□□□ -0.17
CACNA1A-201ENST00000360228 LINC01619G3V211 115 aa13.96□□□□□ -0.17
CACNA1A-201ENST00000360228 K7EMI3 77 aa13.96□□□□□ -0.18
CACNA1A-201ENST00000360228 LAIR2Q6ISS4 152 aa13.96□□□□□ -0.18
CACNA1A-201ENST00000360228 E9PQ18 207 aa13.96□□□□□ -0.18
CACNA1A-201ENST00000360228 MRPL51Q4U2R6 128 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-201ENST00000360228 F8VRH5 84 aa13.95□□□□□ -0.18
CACNA1A-201ENST00000360228 OOSP1A8MZH6 123 aa13.95□□□□□ -0.18
CACNA1A-201ENST00000360228 SRRM5B3KS81 715 aa13.95□□□□□ -0.18
CACNA1A-201ENST00000360228 A0A0U1RQV1 116 aa13.95□□□□□ -0.18
CACNA1A-201ENST00000360228 ETDCA0A1B0GVM5 59 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 CD177Q8N6Q3 437 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 RNF5Q99942 180 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 RNF183Q96D59 192 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 LGALS9BQ3B8N2 356 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 LGALS9CQ6DKI2 356 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 WFDC11Q8NEX6 87 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 C2CD3Q4AC94 2353 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 FAM110DQ8TAY7 271 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 LINC00473A8K010 186 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 EFNA2O43921 213 aa13.94□□□□□ -0.18
CACNA1A-201ENST00000360228 PAQR4Q8N4S7 273 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 ZNF503Q96F45 646 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms