RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 NIPBLQ6KC79 2804 aaeCLIP10.72□□□□□ -0.69
CSNK1E-201ENST00000359867 FAM231BA6NCW3 169 aa10.72□□□□□ -0.69
CSNK1E-201ENST00000359867 LINC01548A6NM66 108 aa10.72□□□□□ -0.69
CSNK1E-201ENST00000359867 C19orf54Q5BKX5 351 aa10.72□□□□□ -0.69
CSNK1E-201ENST00000359867 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
CSNK1E-201ENST00000359867 VPREB3Q9UKI3 123 aa10.72□□□□□ -0.69
CSNK1E-201ENST00000359867 TRBV19A0A075B6N1 114 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 BLCAPP62952 87 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 Q6ZS46 218 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 NEGR1Q7Z3B1 354 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 WIPF2Q8TF74 440 aaPredicted RBP10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 FMC1Q96HJ9 113 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 NAA38Q9BRA0 125 aaKnown RBP10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 MCRIP2Q9BUT9 160 aaKnown RBP10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 ESM1Q9NQ30 184 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 TRAV41A0A0B4J266 112 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 G3V318 75 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 MRPS12O15235 138 aaKnown RBP10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 IGHV3-23P01764 117 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 PGLYRP4Q96LB8 373 aa10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 PEF1Q9UBV8 284 aaKnown RBP10.71□□□□□ -0.69
CSNK1E-201ENST00000359867 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 C2orf70A6NJV1 201 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 TCRAP04437 139 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 IGF1P05019 195 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 CKS1BP61024 79 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 EEF1AKMT3Q96AZ1 226 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 JMJD8Q96S16 334 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 ASCL2Q99929 193 aa10.71□□□□□ -0.7
CSNK1E-201ENST00000359867 A0A087X0K7 114 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 H0Y8G0 127 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 BRI3O95415 125 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 RABAC1Q9UI14 185 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 FAM223BA6NKX1 122 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 ZNF138P52744 262 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 PDE6HQ13956 83 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 FAM223AQ8IWN6 122 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 GPR82Q96P67 336 aa10.7□□□□□ -0.7
CSNK1E-201ENST00000359867 hDV102S1A0JD36 115 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 C7orf71A4D174 169 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 IGHG2P01859 326 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 SHISA2Q6UWI4 295 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 ZNF414Q96IQ9 312 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 LINC00527Q9UJ94 153 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 TRAV8-1A0A0A6YYK1 113 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 TRBV6-1A0A0K0K1D8 114 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 ZNF207O43670 478 aaKnown RBP10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 CLEC3BP05452 202 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 SCGB1A1P11684 91 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 KLF5Q13887 457 aaPredicted RBP10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 GTSF1Q8WW33 167 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
CSNK1E-201ENST00000359867 H3BUA1 57 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 GPR183P32249 361 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 ATP5G2Q06055 141 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 LTAP01374 205 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 RASL11AQ6T310 242 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 SIGLEC15Q6ZMC9 328 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
CSNK1E-201ENST00000359867 A0A1B0GXF2 115 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 OR4C46A6NHA9 309 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 HBBP68871 147 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 SRSF2Q01130 221 aaKnown RBP10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 PSG3Q16557 428 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 C12orf54Q6X4T0 127 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 EXOC3-AS1Q8N2X6 119 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 ZNF418Q8TF45 676 aaPredicted RBP10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 PMCHL2Q9BQD1 86 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 TMEM70Q9BUB7 260 aa10.67□□□□□ -0.7
CSNK1E-201ENST00000359867 JMJD1CQ15652 2540 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 CRLF1O75462 422 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 P01737 135 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 CSN3P07498 182 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 CLEC19AQ6UXS0 136 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 C17orf77Q96MU5 243 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 ZFAND3Q9H8U3 227 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 K7EQM0 130 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 ZNF580Q9UK33 172 aa10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 SETD2Q9BYW2 2564 aaPredicted RBP10.66□□□□□ -0.7
CSNK1E-201ENST00000359867 PPIFP30405 207 aaKnown RBP10.65□□□□□ -0.7
CSNK1E-201ENST00000359867 NPFFR1Q9GZQ6 430 aa10.65□□□□□ -0.7
CSNK1E-201ENST00000359867 AAMDCQ9H7C9 122 aa10.65□□□□□ -0.7
CSNK1E-201ENST00000359867 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 TRGV3P03979 118 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 HILS1P60008 231 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 SLC25A34Q6PIV7 304 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 TMEM86BQ8N661 226 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 USMG5Q96IX5 58 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 ZNF492Q9P255 531 aa10.65□□□□□ -0.71
CSNK1E-201ENST00000359867 GOLT1AQ6ZVE7 132 aa10.64□□□□□ -0.71
CSNK1E-201ENST00000359867 GTF2H5Q6ZYL4 71 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms