RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 TNFRSF6BO95407 300 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 IGLC6P0CF74 106 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 TMEM200BQ69YZ2 307 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 SEM1Q6ZVN7 128 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 MAPKAPK5-AS1Q8N8E1 139 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 OR11H1Q8NG94 326 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 OR11H2Q8NH07 326 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 TMEM158Q8WZ71 300 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 RNF185Q96GF1 192 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 CDIP1Q9H305 208 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 TSPAN13O95857 204 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 ITLN2Q8WWU7 325 aaPredicted RBP11.66□□□□□ -0.54
UBAP1-202ENST00000359544 VCX2Q9H322 139 aa11.66□□□□□ -0.54
UBAP1-202ENST00000359544 HEATR1Q9H583 2144 aaKnown RBP11.66□□□□□ -0.54
UBAP1-202ENST00000359544 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 TRAV40A0A0B4J280 105 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 I3L2K1 104 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 MRPS12O15235 138 aaKnown RBP11.65□□□□□ -0.54
UBAP1-202ENST00000359544 IGKV1-17P01599 117 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 PLNP26678 52 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 GRNP28799 593 aaKnown RBP11.65□□□□□ -0.54
UBAP1-202ENST00000359544 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
UBAP1-202ENST00000359544 Q8N8P6 123 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.54
UBAP1-202ENST00000359544 RPEQ96AT9 228 aa11.65□□□□□ -0.54
UBAP1-202ENST00000359544 CRYGBP07316 175 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 EGR2P11161 476 aaPredicted RBP11.64□□□□□ -0.55
UBAP1-202ENST00000359544 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 PSMG3-AS1Q96PY0 264 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 MRPL35Q9NZE8 188 aaKnown RBP11.64□□□□□ -0.55
UBAP1-202ENST00000359544 FAM90A27PA6NNH2 459 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 TEX22C9J3V5 150 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 HOXA3O43365 443 aaPredicted RBP11.64□□□□□ -0.55
UBAP1-202ENST00000359544 RNF125Q96EQ8 232 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 VKORC1Q9BQB6 163 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 SIGLEC9Q9Y336 463 aa11.64□□□□□ -0.55
UBAP1-202ENST00000359544 A0A0G2JNJ9 132 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 PRR25Q96S07 402 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 Q9UFV3 132 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 CSMD2Q7Z408 3487 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 A0A087WX48 190 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 C19orf84I3L1E1 186 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 IL4P05112 153 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 Q6ZUT4 128 aa11.63□□□□□ -0.55
UBAP1-202ENST00000359544 CSMD1Q96PZ7 3565 aa11.62□□□□□ -0.55
UBAP1-202ENST00000359544 IGHV3-72A0A0B4J1Y9 119 aa11.62□□□□□ -0.55
UBAP1-202ENST00000359544 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
UBAP1-202ENST00000359544 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
UBAP1-202ENST00000359544 TACC2O95359 2948 aa11.62□□□□□ -0.55
UBAP1-202ENST00000359544 A6NJY4 79 aa11.62□□□□□ -0.55
UBAP1-202ENST00000359544 MT-ATP8P03928 68 aa11.62□□□□□ -0.55
UBAP1-202ENST00000359544 PPP1R27Q86WC6 154 aa11.62□□□□□ -0.55
UBAP1-202ENST00000359544 CYSRT1A8MQ03 144 aa11.61□□□□□ -0.55
UBAP1-202ENST00000359544 CD40P25942 277 aa11.61□□□□□ -0.55
UBAP1-202ENST00000359544 MYMXA0A1B0GTQ4 84 aa11.61□□□□□ -0.55
UBAP1-202ENST00000359544 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
UBAP1-202ENST00000359544 MORN3Q6PF18 240 aaPredicted RBP11.61□□□□□ -0.55
UBAP1-202ENST00000359544 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
UBAP1-202ENST00000359544 CNTFRP26992 372 aa11.6□□□□□ -0.55
UBAP1-202ENST00000359544 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
UBAP1-202ENST00000359544 PPDPFLQ8WWR9 84 aa11.6□□□□□ -0.55
UBAP1-202ENST00000359544 SRSF8Q9BRL6 282 aaKnown RBP11.6□□□□□ -0.55
UBAP1-202ENST00000359544 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
UBAP1-202ENST00000359544 IGKV2-40A0A087WW87 121 aaPredicted RBP11.6□□□□□ -0.55
UBAP1-202ENST00000359544 NDUFB3O43676 98 aa11.6□□□□□ -0.55
UBAP1-202ENST00000359544 IGKV2D-40P01614 121 aaPredicted RBP11.6□□□□□ -0.55
UBAP1-202ENST00000359544 LAGE3Q14657 143 aa11.6□□□□□ -0.55
UBAP1-202ENST00000359544 MSRB1Q9NZV6 116 aa11.6□□□□□ -0.55
UBAP1-202ENST00000359544 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
UBAP1-202ENST00000359544 XGP55808 180 aa11.59□□□□□ -0.55
UBAP1-202ENST00000359544 GAS8-AS1O95177 125 aa11.59□□□□□ -0.55
UBAP1-202ENST00000359544 ORM1P02763 201 aa11.59□□□□□ -0.55
UBAP1-202ENST00000359544 FBN2P35556 2912 aa11.59□□□□□ -0.55
UBAP1-202ENST00000359544 NFE4Q86UQ8 179 aa11.59□□□□□ -0.55
UBAP1-202ENST00000359544 RNF183Q96D59 192 aa11.59□□□□□ -0.55
UBAP1-202ENST00000359544 TRAV12-1A0A0B4J245 112 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 K7EIM0 57 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 NDUFA3O95167 84 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 RAB1BQ9H0U4 201 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 H7C1H1 209 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.56
UBAP1-202ENST00000359544 ANAPC13Q9BS18 74 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 ARFGEF3Q5TH69 2177 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 UNC79Q9P2D8 2635 aa11.58□□□□□ -0.56
UBAP1-202ENST00000359544 F8VRH5 84 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 DTX2Q86UW9 622 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 FABP5P3A8MUU1 101 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 FCN3O75636 299 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 IGHV1-8P0DP01 117 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 PSMB2P49721 201 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 DLX6P56179 175 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 CCL8P80075 99 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 TEN1Q86WV5 123 aa11.57□□□□□ -0.56
UBAP1-202ENST00000359544 GATA1P15976 413 aaPredicted RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 FHL3Q13643 280 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms