RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 IGHV4-39P01824 125 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 S100A4P26447 101 aaKnown RBP7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 Q8TAT8 98 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 DPF1Q92782 380 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 G3V318 75 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 PPBPP02775 128 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 RPL24P83731 157 aaKnown RBP7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 PAX8Q06710 450 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 FBLN7Q53RD9 439 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 TRAV26-1A0A087WT03 109 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 TMEM8BA6NDV4 472 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 CRIP1P50238 77 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 BCL6BQ8N143 479 aaPredicted RBP7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 C16orf92Q96LL3 132 aa7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 MRPS16Q9Y3D3 137 aaKnown RBP7.23□□□□□ -1.25
GTF3C2-202ENST00000359541 HIST1H1AQ02539 215 aaPredicted RBP7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 KLK9Q2XQG4 91 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 PRR31Q5SQ13 230 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 KLK9Q9UKQ9 250 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 D6R8Y8 96 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 HERV-K104P63124 156 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 TMEM219Q86XT9 240 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 VGLL1Q99990 258 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 ZFAND3Q9H8U3 227 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 USP24Q9UPU5 2620 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 CRXO43186 299 aaPredicted RBP7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 ZNF207O43670 478 aaKnown RBP7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 C9orf139Q6ZV77 190 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 PIP4P2Q8N4L2 257 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 USMG5Q96IX5 58 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
GTF3C2-202ENST00000359541 IGHV3-66A0A0C4DH42 116 aa7.21□□□□□ -1.25
GTF3C2-202ENST00000359541 H3BUA1 57 aa7.21□□□□□ -1.25
GTF3C2-202ENST00000359541 C19orf84I3L1E1 186 aa7.21□□□□□ -1.25
GTF3C2-202ENST00000359541 ZNF138P52744 262 aa7.21□□□□□ -1.25
GTF3C2-202ENST00000359541 MS4A6AQ9H2W1 248 aa7.21□□□□□ -1.25
GTF3C2-202ENST00000359541 LOC389332A0A1B0GUA5 103 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 TGFAP01135 160 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 TSPOP30536 169 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 CRYBA4P53673 196 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 IGFL4Q6B9Z1 124 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 CCDC140Q96MF4 163 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 SMAD5-AS1Q9Y6J3 95 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 IGKV3-20P01619 116 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 AMN1Q8IY45 258 aa7.21□□□□□ -1.26
GTF3C2-202ENST00000359541 SVEP1Q4LDE5 3571 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 A0A0G2JLM5 398 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 TMEM213A2RRL7 107 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 PRSS1P07477 247 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 DSCR9P59020 149 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 C10orf105Q8TEF2 133 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 URB1-AS1Q96HZ7 61 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 HBDP02042 147 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 IGLL1P15814 213 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 OCIAD2Q56VL3 154 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 BRD3OSQ6XYD6 125 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 HLA-DMBP28068 263 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 GAGE1Q13065 139 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 OR10J6PQ8NGY7 276 aa7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 PRRC2AP48634 2157 aaKnown RBP7.2□□□□□ -1.26
GTF3C2-202ENST00000359541 TCTAP57738 103 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 LINC01559Q495D7 138 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 OR8A1Q8NGG7 326 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 DCHS2Q6V1P9 2916 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 IGHV3OR16-12A0A075B7B8 117 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 IGHV4-61A0A0C4DH41 118 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 NDUFA4O00483 81 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 MSMBP08118 114 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 ERCC8Q13216 396 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 MRPL51Q4U2R6 128 aaKnown RBP7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 MAST4O15021 2626 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 F5H697 171 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 GATA3P23771 443 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 IFI27P40305 119 aaPredicted RBP7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 CRIP2P52943 208 aaPredicted RBP7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 RNF182Q8N6D2 247 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 OR1N2Q8NGR9 330 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 AJUBAQ96IF1 538 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 CST9LQ9H4G1 147 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 HECTD1Q9ULT8 2610 aa7.19□□□□□ -1.26
GTF3C2-202ENST00000359541 B4DSR2 109 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 IGLC6P0CF74 106 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 PEF1Q9UBV8 284 aaKnown RBP7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 MUC21A0A0G2JKD1 596 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 MUC21A0A140T8X8 626 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 H3BUX3 64 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 OVOL1O14753 267 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 CKS1BP61024 79 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 CACNG7P62955 275 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 MUC21Q5SSG8 566 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 IL17RELQ6ZVW7 336 aa7.18□□□□□ -1.26
GTF3C2-202ENST00000359541 SIGLEC8Q9NYZ4 499 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms