RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GNRH2O43555 120 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 CFHR4Q92496 578 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 KIF26BQ2KJY2 2108 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 ETDBQ3ZM63 59 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 J3QLI3 93 aa14.56□□□□□ -0.08
SHANK1-202ENST00000359082 FREM3P0C091 2139 aa14.56□□□□□ -0.08
SHANK1-202ENST00000359082 HLA-DMBP28068 263 aa14.56□□□□□ -0.08
SHANK1-202ENST00000359082 RPL18AQ02543 176 aaKnown RBP14.56□□□□□ -0.08
SHANK1-202ENST00000359082 HOXB4P17483 251 aaPredicted RBP14.56□□□□□ -0.08
SHANK1-202ENST00000359082 C17orf77Q96MU5 243 aa14.56□□□□□ -0.08
SHANK1-202ENST00000359082 BVES-AS1Q5T3Y7 98 aa14.56□□□□□ -0.08
SHANK1-202ENST00000359082 FXYD5Q96DB9 178 aa14.56□□□□□ -0.08
SHANK1-202ENST00000359082 MRPL53Q96EL3 112 aaKnown RBP14.56□□□□□ -0.08
SHANK1-202ENST00000359082 F6UB75 175 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 J3QQQ9 107 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 Q9HAA7 133 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 IGLV3-9A0A075B6K5 115 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 DKK2Q9UBU2 259 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 C15orf53Q8NAA6 179 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 WISP1O95388 367 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 IGLL1P15814 213 aa14.55□□□□□ -0.08
SHANK1-202ENST00000359082 A0A1W2PPM0 123 aa14.54□□□□□ -0.08
SHANK1-202ENST00000359082 C15orf65H3BRN8 121 aa14.54□□□□□ -0.08
SHANK1-202ENST00000359082 SIP14410 1827 aa14.54□□□□□ -0.08
SHANK1-202ENST00000359082 DKK4Q9UBT3 224 aa14.54□□□□□ -0.08
SHANK1-202ENST00000359082 SHISA9B4DS77 424 aa14.54□□□□□ -0.08
SHANK1-202ENST00000359082 IGFBPL1Q8WX77 278 aa14.54□□□□□ -0.08
SHANK1-202ENST00000359082 U3KQE9 123 aa14.54□□□□□ -0.08
SHANK1-202ENST00000359082 SPANXDQ9BXN6 97 aa14.53□□□□□ -0.08
SHANK1-202ENST00000359082 ARTNQ5T4W7 220 aa14.53□□□□□ -0.08
SHANK1-202ENST00000359082 PROK2Q9HC23 129 aa14.53□□□□□ -0.08
SHANK1-202ENST00000359082 NDUFS7O75251 213 aa14.53□□□□□ -0.08
SHANK1-202ENST00000359082 FAM231DQ6ZW35 169 aa14.53□□□□□ -0.08
SHANK1-202ENST00000359082 NCOR1P1Q9H4R4 102 aa14.52□□□□□ -0.08
SHANK1-202ENST00000359082 H3BMG7 143 aa14.52□□□□□ -0.08
SHANK1-202ENST00000359082 GAGE12HA6NDE8 117 aa14.52□□□□□ -0.08
SHANK1-202ENST00000359082 LINC00311Q8N616 119 aa14.52□□□□□ -0.08
SHANK1-202ENST00000359082 YLPM1P49750 1951 aaKnown RBP14.52□□□□□ -0.09
SHANK1-202ENST00000359082 SPRY2O43597 315 aa14.52□□□□□ -0.09
SHANK1-202ENST00000359082 FOXE3Q13461 319 aa14.52□□□□□ -0.09
SHANK1-202ENST00000359082 F8VRH5 84 aa14.52□□□□□ -0.09
SHANK1-202ENST00000359082 DEFB136Q30KP8 78 aa14.52□□□□□ -0.09
SHANK1-202ENST00000359082 RHOHQ15669 191 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 DYNAPQ8N1N2 210 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 LRRK1Q38SD2 2015 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 NBL1P41271 181 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 MGAMO43451 1857 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 IGHV2-5P01817 119 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 CFPP27918 469 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 FOXI2Q6ZQN5 318 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 PYGO2Q9BRQ0 406 aa14.51□□□□□ -0.09
SHANK1-202ENST00000359082 J3QKU1 62 aa14.5□□□□□ -0.09
SHANK1-202ENST00000359082 LTAP01374 205 aa14.5□□□□□ -0.09
SHANK1-202ENST00000359082 APRG1Q8IVJ8 170 aa14.5□□□□□ -0.09
SHANK1-202ENST00000359082 FNDC1Q4ZHG4 1894 aaPredicted RBP14.5□□□□□ -0.09
SHANK1-202ENST00000359082 IGLC1P0CG04 106 aa14.5□□□□□ -0.09
SHANK1-202ENST00000359082 ANKRD29Q8N6D5 301 aa14.5□□□□□ -0.09
SHANK1-202ENST00000359082 PTPRDP23468 1912 aa14.5□□□□□ -0.09
SHANK1-202ENST00000359082 K7EN84 100 aa14.49□□□□□ -0.09
SHANK1-202ENST00000359082 CRYBA4P53673 196 aa14.49□□□□□ -0.09
SHANK1-202ENST00000359082 C20orf78Q9BR46 151 aa14.49□□□□□ -0.09
SHANK1-202ENST00000359082 DEFB112Q30KQ8 113 aa14.49□□□□□ -0.09
SHANK1-202ENST00000359082 K7EM74 188 aa14.49□□□□□ -0.09
SHANK1-202ENST00000359082 RTTNQ86VV8 2226 aa14.49□□□□□ -0.09
SHANK1-202ENST00000359082 PLXNA3P51805 1871 aa14.49□□□□□ -0.09
SHANK1-202ENST00000359082 IGHV4-59P01825 116 aa14.48□□□□□ -0.09
SHANK1-202ENST00000359082 Q9H8V8 135 aa14.48□□□□□ -0.09
SHANK1-202ENST00000359082 LY6G6EA0A0G2JKS1 128 aa14.48□□□□□ -0.09
SHANK1-202ENST00000359082 CLPSL1A2RUU4 121 aa14.48□□□□□ -0.09
SHANK1-202ENST00000359082 C10orf91Q5T1B1 145 aa14.48□□□□□ -0.09
SHANK1-202ENST00000359082 U3KQA8 63 aa14.48□□□□□ -0.09
SHANK1-202ENST00000359082 BOD1L2Q8IYS8 172 aa14.48□□□□□ -0.09
SHANK1-202ENST00000359082 IGHV4-28A0A0C4DH34 117 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 ELANEP08246 267 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 SRSF2Q01130 221 aaKnown RBP14.47□□□□□ -0.09
SHANK1-202ENST00000359082 IGFL3Q6UXB1 125 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 ORMDL1Q9P0S3 153 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 C12orf74Q32Q52 190 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 AMTNQ6UX39 209 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 AHCTF1Q8WYP5 2266 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 CCL24O00175 119 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 BUB3O43684 328 aa14.47□□□□□ -0.09
SHANK1-202ENST00000359082 TICRRQ7Z2Z1 1910 aa14.46□□□□□ -0.09
SHANK1-202ENST00000359082 PRB2P02812 416 aaPredicted RBP14.46□□□□□ -0.09
SHANK1-202ENST00000359082 BAALC-AS2P0C853 105 aa14.46□□□□□ -0.09
SHANK1-202ENST00000359082 EGR2P11161 476 aaPredicted RBP14.46□□□□□ -0.09
SHANK1-202ENST00000359082 ZNF491Q8N8L2 437 aa14.46□□□□□ -0.09
SHANK1-202ENST00000359082 SLURP1P55000 103 aa14.46□□□□□ -0.1
SHANK1-202ENST00000359082 C5orf47Q569G3 176 aa14.46□□□□□ -0.1
SHANK1-202ENST00000359082 IGLV1-44P01699 117 aa14.45□□□□□ -0.1
SHANK1-202ENST00000359082 SLC25A29Q8N8R3 303 aa14.45□□□□□ -0.1
SHANK1-202ENST00000359082 NTN5Q8WTR8 489 aaPredicted RBP14.45□□□□□ -0.1
SHANK1-202ENST00000359082 IGHV3-30P01768 117 aa14.45□□□□□ -0.1
SHANK1-202ENST00000359082 IGHV3-33P01772 117 aa14.45□□□□□ -0.1
SHANK1-202ENST00000359082 IGHV3-30-3P0DP02 117 aa14.45□□□□□ -0.1
SHANK1-202ENST00000359082 IGHV3-30-5P0DP03 117 aa14.45□□□□□ -0.1
SHANK1-202ENST00000359082 C1orf147Q96MC9 270 aaPredicted RBP14.45□□□□□ -0.1
SHANK1-202ENST00000359082 C5orf38Q86SI9 138 aa14.45□□□□□ -0.1
SHANK1-202ENST00000359082 KLF2Q9Y5W3 355 aaPredicted RBP14.45□□□□□ -0.1
SHANK1-202ENST00000359082 VPREB3Q9UKI3 123 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms