RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 ZNF705FA8MVS1 300 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 SNURFLB1AK76 121 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 SOCS3O14543 225 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 TSPOP30536 169 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 TCL1AP56279 114 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 HBBP68871 147 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 FABP9Q0Z7S8 132 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 TCTEX1D4Q5JR98 221 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 NUP35Q8NFH5 326 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 ODF3Q96PU9 254 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 NEU1Q99519 415 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 VGLL1Q99990 258 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 AGPAT4-IT1Q9H0P7 198 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 MS4A6AQ9H2W1 248 aa8.13□□□□□ -1.11
TRAPPC4-201ENST00000359005 A0A1B0GUT8 65 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 LOC105371267A0A1B0GV96 52 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 OR4C46A6NHA9 309 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 F2Z2F3 143 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BKO60814 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 SH2D1AO60880 128 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 ORM1P02763 201 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BJP06899 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 TRGC1P0CF51 173 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BOP23527 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 S100A2P29034 98 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BBP33778 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 LEPP41159 167 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BDP58876 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BCP62807 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST2H2BEQ16778 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 IGFL4Q6B9Z1 124 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 OR8A1Q8NGG7 326 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BHQ93079 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BNQ99877 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIST1H2BMQ99879 126 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 MRPL18Q9H0U6 180 aaKnown RBP8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 SIGLEC8Q9NYZ4 499 aa8.12□□□□□ -1.11
TRAPPC4-201ENST00000359005 DNAH3Q8TD57 4116 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 TRAV21A0A0B4J279 112 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 C5orf52A6NGY3 159 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 K7EQG2 157 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 CCL24O00175 119 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 APCSP02743 223 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 GPX1P07203 203 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 HLA-DMBP28068 263 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 SLURP1P55000 103 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 NDUFA6P56556 154 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 SNRPEP62304 92 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 MRPL54Q6P161 138 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 DCANP1Q8TF63 244 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 C8orf49Q96NF6 230 aa8.11□□□□□ -1.11
TRAPPC4-201ENST00000359005 IGKV3-7A0A075B6H7 116 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 UBE2CO00762 179 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 CA1P00915 261 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 ERCC8Q13216 396 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 FHL3Q13643 280 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 SMIM15Q7Z3B0 74 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 WFDC3Q8IUB2 231 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 OR2K2Q8NGT1 345 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 Q8TAT8 98 aa8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 SPAG8Q99932 426 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-201ENST00000359005 CD28P10747 220 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 CRISP2P16562 243 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 PSMG4Q5JS54 123 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 FOXI2Q6ZQN5 318 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 KCNS1Q96KK3 526 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 PGLYRP4Q96LB8 373 aa8.09□□□□□ -1.11
TRAPPC4-201ENST00000359005 SPINK4O60575 86 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 CSN3P07498 182 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 HOXA5P20719 270 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 CAMPP49913 170 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 CRIP1P50238 77 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 CACNG7P62955 275 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 DEFB136Q30KP8 78 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 COA6Q5JTJ3 125 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 DMRTA1Q5VZB9 504 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 TMEM136Q6ZRR5 245 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 C11orf44Q8N8P7 122 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 DLX4Q92988 240 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 RAX2Q96IS3 184 aa8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 CITED2Q99967 270 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC4-201ENST00000359005 A0A1B0GXF2 115 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 TFPI2P48307 235 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 AKR1D1P51857 326 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 DEFA6Q01524 100 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 GTSF1Q8WW33 167 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 C20orf173Q96LM9 149 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 TPPP3Q9BW30 176 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 GPR61Q9BZJ8 451 aa8.07□□□□□ -1.12
TRAPPC4-201ENST00000359005 A0A0J9YX75 114 aa8.06□□□□□ -1.12
TRAPPC4-201ENST00000359005 A0A1W2PRX2 142 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms