RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 V9GYV3 84 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 CDKN1BP46527 198 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 ZFP36L1Q07352 338 aaKnown RBP8.93□□□□□ -0.98
COL11A1-202ENST00000358392 TPSG1Q9NRR2 321 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 NDUFS7O75251 213 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 GNRH2O43555 120 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 LYL1P12980 280 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 ZNF726P1Q15940 193 aa8.93□□□□□ -0.98
COL11A1-202ENST00000358392 COL4A5P29400 1685 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 HERVK_113P63121 156 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 COL24A1Q17RW2 1714 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 LGALS9BQ3B8N2 356 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 LGALS9CQ6DKI2 356 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 SH2D6Q7Z4S9 175 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 TET1Q8NFU7 2136 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 NTN3O00634 580 aaPredicted RBP8.92□□□□□ -0.98
COL11A1-202ENST00000358392 C8orf31Q8N9H6 132 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 DYSFO75923 2080 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 MRPL23Q16540 153 aaKnown RBP8.92□□□□□ -0.98
COL11A1-202ENST00000358392 FAM120AOSQ5T036 256 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 Q9H8V8 135 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 TMEM14BQ9NUH8 114 aa8.92□□□□□ -0.98
COL11A1-202ENST00000358392 CD59P13987 128 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 FAM186AA6NE01 2351 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 ZNF134P52741 427 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 APOC4P55056 127 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 COX7B2Q8TF08 81 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 IGFBPL1Q8WX77 278 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 BUB3O43684 328 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 PRR30Q53SZ7 412 aaPredicted RBP8.91□□□□□ -0.98
COL11A1-202ENST00000358392 C17orf77Q96MU5 243 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 NACAE9PAV3 2078 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 IGLV10-54A0A075B6I4 117 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 F6UB75 175 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 F8VRH5 84 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 IGLV3-19P01714 112 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 TMEM190Q8WZ59 177 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 PRR25Q96S07 402 aa8.91□□□□□ -0.98
COL11A1-202ENST00000358392 IGHV2-70P01814 119 aa8.9□□□□□ -0.98
COL11A1-202ENST00000358392 MSMBP08118 114 aa8.9□□□□□ -0.98
COL11A1-202ENST00000358392 C5orf38Q86SI9 138 aa8.9□□□□□ -0.98
COL11A1-202ENST00000358392 PCP2Q8IVA1 136 aa8.9□□□□□ -0.98
COL11A1-202ENST00000358392 NDUFA4L2Q9NRX3 87 aa8.9□□□□□ -0.98
COL11A1-202ENST00000358392 UBE2E1P51965 193 aa8.9□□□□□ -0.98
COL11A1-202ENST00000358392 IGKV1-6A0A0C4DH72 117 aa8.9□□□□□ -0.98
COL11A1-202ENST00000358392 FNDC10F2Z333 226 aa8.9□□□□□ -0.99
COL11A1-202ENST00000358392 COL5A3P25940 1745 aaPredicted RBP8.9□□□□□ -0.99
COL11A1-202ENST00000358392 TRBV6-6A0A0A6YYG2 114 aa8.9□□□□□ -0.99
COL11A1-202ENST00000358392 NCR3O14931 201 aa8.9□□□□□ -0.99
COL11A1-202ENST00000358392 TSC2P49815 1807 aa8.9□□□□□ -0.99
COL11A1-202ENST00000358392 CDPF1Q6NVV7 123 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 DOPEY2Q9Y3R5 2298 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 FOXE3Q13461 319 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 RNF183Q96D59 192 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 H3BRN7 92 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 HELZP42694 1942 aaKnown RBP8.89□□□□□ -0.99
COL11A1-202ENST00000358392 DIAPH2-AS1Q14236 149 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 A0A1B0GX51 115 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 NDUFC2O95298 119 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 RMI2Q96E14 147 aa8.89□□□□□ -0.99
COL11A1-202ENST00000358392 SP5Q6BEB4 398 aaPredicted RBP8.88□□□□□ -0.99
COL11A1-202ENST00000358392 IGHV1-69DA0A0B4J2H0 117 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 IGHV1-69P01742 117 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 DYNAPQ8N1N2 210 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 U3KQE9 123 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 CEP290O15078 2479 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 IGLC7A0M8Q6 106 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 GATA1P15976 413 aaPredicted RBP8.88□□□□□ -0.99
COL11A1-202ENST00000358392 DAND5Q8N907 189 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 ETDCA0A1B0GVM5 59 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 CFC1BP0CG36 223 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 CFC1P0CG37 223 aa8.88□□□□□ -0.99
COL11A1-202ENST00000358392 TNRC6BQ9UPQ9 1833 aaKnown RBP8.88□□□□□ -0.99
COL11A1-202ENST00000358392 GTF3C1Q12789 2109 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 VOPP1Q96AW1 172 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 K7EN84 100 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 IGHV3-30-3P0DP02 117 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 YPEL3P61236 119 aaPredicted RBP8.87□□□□□ -0.99
COL11A1-202ENST00000358392 ZNF833PQ6ZTB9 187 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 BRK1Q8WUW1 75 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 SCN10AQ9Y5Y9 1956 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 DOCK8Q8NF50 2099 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 MRPL53Q96EL3 112 aaKnown RBP8.87□□□□□ -0.99
COL11A1-202ENST00000358392 ESM1Q9NQ30 184 aa8.87□□□□□ -0.99
COL11A1-202ENST00000358392 FAM236AA0A1B0GUQ0 79 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 FAM236BA0A1B0GV22 79 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 ZNF493Q6ZR52 646 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 RPL39LQ96EH5 51 aaKnown RBP8.86□□□□□ -0.99
COL11A1-202ENST00000358392 ACYP1P07311 99 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 PSMB8P28062 276 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 C17orf58Q2M2W7 97 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 APRG1Q8IVJ8 170 aa8.86□□□□□ -0.99
COL11A1-202ENST00000358392 B3GALT5-AS1P59052 145 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms