RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ZNF492Q9P255 531 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 PLA2G10O15496 165 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 GATA1P15976 413 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-203ENST00000357654 H2BFSP57053 126 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 C18orf12Q96KH6 178 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 TRBV20-1A0A075B6N2 111 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 PIN1P1O15428 100 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 SPAG11BQ08648 103 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 NUP98P52948 1817 aa4.59□□□□□ -1.67
BRCA1-203ENST00000357654 RALGAPA1Q6GYQ0 2036 aa4.59□□□□□ -1.68
BRCA1-203ENST00000357654 UNC13CQ8NB66 2214 aa4.59□□□□□ -1.68
BRCA1-203ENST00000357654 DOCK1Q14185 1865 aa4.59□□□□□ -1.68
BRCA1-203ENST00000357654 TRBV10-2A0A0K0K1G8 114 aa4.59□□□□□ -1.68
BRCA1-203ENST00000357654 TRIP12Q14669 1992 aaPredicted RBP4.59□□□□□ -1.68
BRCA1-203ENST00000357654 SLPIP03973 132 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 FOXI2Q6ZQN5 318 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 MRPS18CQ9Y3D5 142 aaKnown RBP4.58□□□□□ -1.68
BRCA1-203ENST00000357654 TRAV26-1A0A087WT03 109 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 IFI6P09912 130 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 CT83Q5H943 113 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 TM2D1Q9BX74 207 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 TPSG1Q9NRR2 321 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 KIR2DL5BA0A0G2JN68 375 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 KIR2DL5BA0A0G2JPC4 375 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 KIR2DL5AQ8N109 375 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 IGKV1D-17A0A075B6S4 117 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 HLA-DMBP28068 263 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 UPK3BQ9BT76 320 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 SRRM5B3KS81 715 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 SPINK1P00995 79 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 IGLV2-14P01704 120 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 Q86TA4 180 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 CIRBP-AS1Q8TBR5 109 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 RNF5Q99942 180 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 TAF1LQ8IZX4 1826 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 TRBV12-3P01733 135 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 PSMB8P28062 276 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 BVES-AS1Q5T3Y7 98 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 SERP2Q8N6R1 65 aa4.58□□□□□ -1.68
BRCA1-203ENST00000357654 LYPD6Q86Y78 171 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 DIRC1Q969H9 104 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 SHANK2-AS3Q9BTD1 123 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 FBLN5Q9UBX5 448 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 YLPM1P49750 1951 aaKnown RBP4.57□□□□□ -1.68
BRCA1-203ENST00000357654 RNF222A6NCQ9 220 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 WIPF3A6NGB9 483 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 IFITM1P13164 125 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 ZFP2Q6ZN57 461 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 SCXQ7RTU7 201 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 LINC00337Q8N6G1 96 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 C5orf63A6NC05 138 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 NTF4P34130 210 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 HGFACQ04756 655 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 Q6ZS92 163 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 Q5BKY6 102 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 LY6G6FQ5SQ64 297 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 SH2D6Q7Z4S9 175 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 MTCL1Q9Y4B5 1905 aaKnown RBP4.57□□□□□ -1.68
BRCA1-203ENST00000357654 INTS1Q8N201 2190 aaKnown RBP4.57□□□□□ -1.68
BRCA1-203ENST00000357654 K7ERJ3 54 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 FANCMQ8IYD8 2048 aa4.57□□□□□ -1.68
BRCA1-203ENST00000357654 LINC00473A8K010 186 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 MIA3Q5JRA6 1907 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 PI4KAP42356 2102 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 ITGB4P16144 1822 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 NTN3O00634 580 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-203ENST00000357654 TMEM61Q8N0U2 210 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 OPRPNQ99935 248 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-203ENST00000357654 SND1-IT1Q9HBX3 110 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 LINC00482Q8N8I6 264 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 ESPL1Q14674 2120 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 TRAV9-1A0A075B6T8 112 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 PATJQ8NI35 1801 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 NDUFC2O95298 119 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 LINC00271P0C7V0 271 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 LOXP28300 417 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-203ENST00000357654 RP1L1Q8IWN7 2480 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-203ENST00000357654 ANKRD31Q8N7Z5 1873 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 TCF20Q9UGU0 1960 aaKnown RBP4.56□□□□□ -1.68
BRCA1-203ENST00000357654 Q0VG73 95 aa4.56□□□□□ -1.68
BRCA1-203ENST00000357654 DNAJC9-AS1A6NH13 148 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 SYS1-DBNDD2H3BUS1 97 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 K7EM74 188 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 GREM1O60565 184 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 LHFPL1Q86WI0 220 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 PLXNB2O15031 1838 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 CKAP5Q14008 2032 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 C9JQL5 133 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 SMIM10L1P0DMW3 83 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 BLCAPP62952 87 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 GTF3C1Q12789 2109 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 DIAPH2-AS1Q14236 149 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 TMEM75Q8N9X5 138 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 SMIM10Q96HG1 83 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 THADAQ6YHU6 1953 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 WFDC1Q9HC57 220 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 LOC285556D6RIA3 1793 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 CENPVL3A0A0U1RRI6 287 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms