RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 RNF183Q96D59 192 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 H3BVH4 76 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 MED14OSP0DP75 135 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 RHOHQ15669 191 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 VGLL1Q99990 258 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 PLCE1Q9P212 2302 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 ADARB2-AS1A8MUL3 147 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 ADAMTSL5Q6ZMM2 481 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 C17orf77Q96MU5 243 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 ANKRD17O75179 2603 aaKnown RBP6.85□□□□□ -1.31
UPF2-202ENST00000357604 GRIFINA4D1Z8 144 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 F8W735 103 aaPredicted RBP6.85□□□□□ -1.31
UPF2-202ENST00000357604 G3V3Q6 166 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 PAX4O43316 350 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
UPF2-202ENST00000357604 LTAP01374 205 aa6.85□□□□□ -1.31
UPF2-202ENST00000357604 ANXA2RQ3ZCQ2 193 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 KIR2DL4Q99706 377 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 SRP19P09132 144 aaKnown RBP6.84□□□□□ -1.31
UPF2-202ENST00000357604 FAM167A-AS1Q96KT0 104 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 C8orf49Q96NF6 230 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 PRB2P02812 416 aaPredicted RBP6.84□□□□□ -1.31
UPF2-202ENST00000357604 MRPL23Q16540 153 aaKnown RBP6.84□□□□□ -1.31
UPF2-202ENST00000357604 Q6ZN92 141 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 DPH3P1Q9H4G8 78 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 A0A1B0GUT8 65 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 HBBP68871 147 aa6.84□□□□□ -1.31
UPF2-202ENST00000357604 IZUMO1RA6ND01 250 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 MT-ND6P03923 174 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 S100A2P29034 98 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 HLA-DMBP28068 263 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 TCTAP57738 103 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 OR10J3Q5JRS4 329 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 APCSP02743 223 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 TCL1AP56279 114 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 CT83Q5H943 113 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 GFI1BQ5VTD9 330 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 MAP1LC3AQ9H492 121 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 IGHV4-28A0A0C4DH34 117 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 CAMPP49913 170 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 ST20Q9HBF5 79 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 CREBBPQ92793 2442 aa6.83□□□□□ -1.32
UPF2-202ENST00000357604 A8MZ25 164 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 CKS2P33552 79 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 C20orf173Q96LM9 149 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 TRAPPC1Q9Y5R8 145 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 DOCK11Q5JSL3 2073 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 IGSF10Q6WRI0 2623 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 TMEM218A2RU14 115 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 LINC00862A6NCI5 91 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 ODF3L2Q3SX64 289 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 IL36BQ9NZH7 164 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 ROS1P08922 2347 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 AKAP6Q13023 2319 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 GGTLC3B5MD39 225 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 CXCL1P09341 107 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 FABP9Q0Z7S8 132 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 ZNF726P1Q15940 193 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 ATP5L2Q7Z4Y8 100 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 C11orf52Q96A22 123 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 TRAV8-2A0A0B4J237 113 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 TRAV4A0A0B4J268 109 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 ZNF876PQ49A33 203 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 LINC00467Q9BRT7 94 aa6.82□□□□□ -1.32
UPF2-202ENST00000357604 FAM231BA6NCW3 169 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 C11orf68Q9H3H3 251 aaKnown RBP6.81□□□□□ -1.32
UPF2-202ENST00000357604 PKIGQ9Y2B9 76 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 BAGE3Q86Y29 109 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 LINC01549A6NIU2 74 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 PSCAO43653 123 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 NUDT10Q8NFP7 164 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 PRSS3P2Q8NHM4 247 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 NUDT11Q96G61 164 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 GSN-AS1Q9NRJ2 163 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 HLA-DQA1P01909 254 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 COTL1Q14019 142 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 DNAJC30Q96LL9 226 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
UPF2-202ENST00000357604 IGLL5B9A064 214 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 PPBPP02775 128 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 GCSHP23434 173 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 CRISP2P16562 243 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 EVI2AP22794 236 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 LINC01559Q495D7 138 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 MRPL54Q6P161 138 aaKnown RBP6.8□□□□□ -1.32
UPF2-202ENST00000357604 DEFB131BA0A096LNP1 70 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 A0A0J9YWU9 116 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 P0DMU3 169 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 LAMA2P24043 3122 aaKnown RBP6.8□□□□□ -1.32
UPF2-202ENST00000357604 C1orf196B1AJZ1 125 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 TYMSP04818 313 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 AKR1D1P51857 326 aa6.8□□□□□ -1.32
UPF2-202ENST00000357604 MRPL16Q9NX20 251 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms