RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 LIFP15018 202 aa6.96□□□□□ -1.29
RBFOX1-203ENST00000355637 HLA-DMBP28068 263 aa6.96□□□□□ -1.29
RBFOX1-203ENST00000355637 LOXL3P58215 753 aa6.96□□□□□ -1.29
RBFOX1-203ENST00000355637 SLC25A48Q6ZT89 311 aaKnown RBP6.96□□□□□ -1.29
RBFOX1-203ENST00000355637 IMUPQ9GZP8 106 aa6.96□□□□□ -1.29
RBFOX1-203ENST00000355637 PEMTQ9UBM1 199 aa6.96□□□□□ -1.29
RBFOX1-203ENST00000355637 ADAMTS20P59510 1910 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 WNT9BO14905 357 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 AVPP01185 164 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 CCL4P13236 92 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 PCOLCEQ15113 449 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 ITLN1Q8WWA0 313 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 SRXN1Q9BYN0 137 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 ZNF492Q9P255 531 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 SSUH2Q9Y2M2 353 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 IGHV3-64DA0A0J9YX35 117 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 TRBV10-2A0A0K0K1G8 114 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 DEFB108AA8MXU0 73 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 UPK2O00526 184 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 COX7A2P2O60397 106 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 ELANEP08246 267 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 SS18Q15532 418 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 MLANAQ16655 118 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 C10orf128Q5T292 105 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 Q71RC1 249 aaPredicted RBP6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 METTL26Q96S19 204 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 TMEM243Q9BU79 118 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 TP53TG1Q9Y2A0 90 aa6.96□□□□□ -1.3
RBFOX1-203ENST00000355637 SHISA9B4DS77 424 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 ATP5G1P05496 136 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 RNASE2P10153 161 aaKnown RBP6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 ERCC8Q13216 396 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 TDHQ8IZJ6 230 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 NEXN-AS1Q8NBZ9 246 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 NUP37Q8NFH4 326 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 TRAV12-3A0A0B4J271 114 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 IGHV3-48P01763 117 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 MRPL51Q4U2R6 128 aaKnown RBP6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 FAM27BQ5VT28 67 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 STHQ8IWL8 128 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 FAM223AQ8IWN6 122 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 TET2Q6N021 2002 aaPredicted RBP6.95□□□□□ -1.3
RBFOX1-203ENST00000355637 IGHV1-45A0A0A0MS14 117 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 TRAV8-3A0A0A6YYJ7 113 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 IGHV3-43A0A0B4J1X8 118 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 IGHV3-43DP0DP04 118 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 FOLR3P41439 243 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 RBM3P98179 157 aaKnown RBP6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 MRPL14Q6P1L8 145 aaKnown RBP6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 FAM19A1Q7Z5A9 133 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 FOXB1Q99853 325 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 A0A096LPE4 126 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 A0A1W2PPZ6 126 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 K7ENP7 123 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 GFRA3O60609 400 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 NGFP01138 241 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 PRR20EP86478 221 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 PRR20CP86479 221 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 PRR20DP86480 221 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 PRR20BP86481 221 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 PRR20AP86496 221 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 RNF182Q8N6D2 247 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 PRSS22Q9GZN4 317 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 GFRA4Q9GZZ7 299 aa6.94□□□□□ -1.3
RBFOX1-203ENST00000355637 TRAV3A0A0B4J244 114 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 IQCF6A8MYZ5 107 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 IGHV3-13P01766 116 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 PRSS2P07478 247 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 SDIM1Q6ZPB5 146 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 Q6ZSR3 168 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 IGLV3-1P01715 115 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 FAM104BQ5XKR9 115 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 PRIMA1Q86XR5 153 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 LY6LH3BQJ8 138 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 M0R3E3 92 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 CCL8P80075 99 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 CT83Q5H943 113 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 RITA1Q96K30 269 aa6.93□□□□□ -1.3
RBFOX1-203ENST00000355637 IGKV3D-7A0A0C4DH55 119 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 H3BT86 120 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 RFPL3SP0C7P2 107 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 CCL11P51671 97 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 LYZL1Q6UWQ5 148 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 SERP2Q8N6R1 65 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 MPLKIPQ8TAP9 179 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 ZNF714Q96N38 554 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 CACNA1EQ15878 2313 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 VPS13AQ96RL7 3174 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 LY6G6EA0A0G2JKS1 128 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 DKK1O94907 266 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 CRYGSP22914 178 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 DAZAP2Q15038 168 aaPredicted RBP6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 Q8N8P6 123 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 SMCR5Q8TEV8 140 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 IMMP1LQ96LU5 166 aa6.92□□□□□ -1.3
RBFOX1-203ENST00000355637 U3KQA8 63 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms