RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ORM1P02763 201 aa19.38■□□□□ 0.69
CLK2-201ENST00000355560 SAMD13Q5VXD3 122 aa19.38■□□□□ 0.69
CLK2-201ENST00000355560 WFDC3Q8IUB2 231 aa19.38■□□□□ 0.69
CLK2-201ENST00000355560 HIST2H2BDQ6DRA6 164 aa19.37■□□□□ 0.69
CLK2-201ENST00000355560 KLHL30-AS1Q8NEE0 82 aa19.37■□□□□ 0.69
CLK2-201ENST00000355560 HIVEP2P31629 2446 aa19.37■□□□□ 0.69
CLK2-201ENST00000355560 F6UB75 175 aa19.37■□□□□ 0.69
CLK2-201ENST00000355560 RPS20P60866 119 aaKnown RBP19.37■□□□□ 0.69
CLK2-201ENST00000355560 Q0VG73 95 aa19.37■□□□□ 0.69
CLK2-201ENST00000355560 ZNF418Q8TF45 676 aaPredicted RBP19.37■□□□□ 0.69
CLK2-201ENST00000355560 LINC00477Q96M19 166 aa19.37■□□□□ 0.69
CLK2-201ENST00000355560 MS4A6AQ9H2W1 248 aa19.37■□□□□ 0.69
CLK2-201ENST00000355560 F2Z2F3 143 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 ID1P41134 155 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 SRSF2Q01130 221 aaKnown RBP19.36■□□□□ 0.69
CLK2-201ENST00000355560 HIST1H1AQ02539 215 aaPredicted RBP19.36■□□□□ 0.69
CLK2-201ENST00000355560 BAGE3Q86Y29 109 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 DUX3Q96PT4 197 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 LENEPQ9Y5L5 61 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 NUPR1O60356 82 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 RIGQ13278 110 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 OR8A1Q8NGG7 326 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 DPF1Q92782 380 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 BORCS7Q96B45 105 aa19.36■□□□□ 0.69
CLK2-201ENST00000355560 TFPI2P48307 235 aa19.35■□□□□ 0.69
CLK2-201ENST00000355560 LINC01559Q495D7 138 aa19.35■□□□□ 0.69
CLK2-201ENST00000355560 LYZL1Q6UWQ5 148 aa19.35■□□□□ 0.69
CLK2-201ENST00000355560 LY6G6DO95868 133 aa19.34■□□□□ 0.69
CLK2-201ENST00000355560 LINC00310P59036 64 aa19.34■□□□□ 0.69
CLK2-201ENST00000355560 OR10J3Q5JRS4 329 aa19.34■□□□□ 0.69
CLK2-201ENST00000355560 OR1N2Q8NGR9 330 aa19.34■□□□□ 0.69
CLK2-201ENST00000355560 OTOGQ6ZRI0 2925 aa19.34■□□□□ 0.69
CLK2-201ENST00000355560 SERF1AO75920 110 aa19.34■□□□□ 0.69
CLK2-201ENST00000355560 HILS1P60008 231 aa19.34■□□□□ 0.69
CLK2-201ENST00000355560 M0QZ24 198 aa19.33■□□□□ 0.69
CLK2-201ENST00000355560 ZNF575Q86XF7 245 aa19.33■□□□□ 0.69
CLK2-201ENST00000355560 TMEM18Q96B42 140 aa19.33■□□□□ 0.69
CLK2-201ENST00000355560 FER1L6-AS1Q8NA97 138 aa19.33■□□□□ 0.68
CLK2-201ENST00000355560 PRR9Q5T870 116 aa19.32■□□□□ 0.68
CLK2-201ENST00000355560 C11orf44Q8N8P7 122 aa19.32■□□□□ 0.68
CLK2-201ENST00000355560 A0A1B0GW15 77 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 PYY3Q5JQD4 70 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 ADAMTSL5Q6ZMM2 481 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 LINC01006Q8NI28 216 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 C11orf21Q9P2W6 132 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 J3KRW8 73 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 IGLC6P0CF74 106 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 CTRLP40313 264 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 ZFAND2AQ8N6M9 145 aa19.31■□□□□ 0.68
CLK2-201ENST00000355560 IGKV3D-20A0A0C4DH25 116 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 ZNF688P0C7X2 276 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 SSTP61278 116 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 C18orf32Q8TCD1 76 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 ALKBH7Q9BT30 221 aaPredicted RBP19.3■□□□□ 0.68
CLK2-201ENST00000355560 Q6ZQT7 251 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 OR9G4Q8NGQ1 327 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 C16orf95Q9H693 158 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 PEMTQ9UBM1 199 aa19.3■□□□□ 0.68
CLK2-201ENST00000355560 MUC21A0A0G2JKD1 596 aa19.29■□□□□ 0.68
CLK2-201ENST00000355560 MUC21A0A140T8X8 626 aa19.29■□□□□ 0.68
CLK2-201ENST00000355560 K7EQG2 157 aa19.29■□□□□ 0.68
CLK2-201ENST00000355560 ESDP10768 282 aa19.29■□□□□ 0.68
CLK2-201ENST00000355560 SNRPD3P62318 126 aaKnown RBP19.29■□□□□ 0.68
CLK2-201ENST00000355560 PSMG4Q5JS54 123 aa19.29■□□□□ 0.68
CLK2-201ENST00000355560 MUC21Q5SSG8 566 aa19.29■□□□□ 0.68
CLK2-201ENST00000355560 RCHY1Q96PM5 261 aa19.29■□□□□ 0.68
CLK2-201ENST00000355560 WFDC12Q8WWY7 111 aa19.28■□□□□ 0.68
CLK2-201ENST00000355560 DLX4Q92988 240 aaPredicted RBP19.28■□□□□ 0.68
CLK2-201ENST00000355560 FAM19A4Q96LR4 140 aa19.28■□□□□ 0.68
CLK2-201ENST00000355560 CD28P10747 220 aa19.28■□□□□ 0.68
CLK2-201ENST00000355560 IQCJQ1A5X6 159 aa19.28■□□□□ 0.68
CLK2-201ENST00000355560 GATD1Q8NB37 220 aa19.28■□□□□ 0.68
CLK2-201ENST00000355560 LOC102724200A0A096LPH7 203 aaPredicted RBP19.27■□□□□ 0.68
CLK2-201ENST00000355560 A0A1W2PRX2 142 aa19.27■□□□□ 0.67
CLK2-201ENST00000355560 GPX1P07203 203 aa19.25■□□□□ 0.67
CLK2-201ENST00000355560 TRBV7-9A0A0J9YWB2 115 aa19.25■□□□□ 0.67
CLK2-201ENST00000355560 NIT2Q9NQR4 276 aa19.25■□□□□ 0.67
CLK2-201ENST00000355560 PAFAH1B2P68402 229 aa19.24■□□□□ 0.67
CLK2-201ENST00000355560 ZNF493Q6ZR52 646 aa19.24■□□□□ 0.67
CLK2-201ENST00000355560 RAX2Q96IS3 184 aa19.24■□□□□ 0.67
CLK2-201ENST00000355560 CD33P20138 364 aa19.24■□□□□ 0.67
CLK2-201ENST00000355560 KCNS1Q96KK3 526 aa19.24■□□□□ 0.67
CLK2-201ENST00000355560 CITED2Q99967 270 aaPredicted RBP19.24■□□□□ 0.67
CLK2-201ENST00000355560 SETD2Q9BYW2 2564 aaPredicted RBP19.23■□□□□ 0.67
CLK2-201ENST00000355560 TRAV21A0A0B4J279 112 aa19.23■□□□□ 0.67
CLK2-201ENST00000355560 NTF3P20783 257 aa19.23■□□□□ 0.67
CLK2-201ENST00000355560 TWIST1Q15672 202 aa19.23■□□□□ 0.67
CLK2-201ENST00000355560 JMJD8Q96S16 334 aa19.23■□□□□ 0.67
CLK2-201ENST00000355560 CNFNQ9BYD5 112 aa19.23■□□□□ 0.67
CLK2-201ENST00000355560 SAMD10Q9BYL1 202 aa19.23■□□□□ 0.67
CLK2-201ENST00000355560 KIR3DS1Q14943 382 aa19.22■□□□□ 0.67
CLK2-201ENST00000355560 APRG1Q8IVJ8 170 aa19.22■□□□□ 0.67
CLK2-201ENST00000355560 NAGKQ9UJ70 344 aa19.22■□□□□ 0.67
CLK2-201ENST00000355560 RNASE4P34096 147 aaKnown RBP19.22■□□□□ 0.67
CLK2-201ENST00000355560 CSN3P07498 182 aa19.21■□□□□ 0.67
CLK2-201ENST00000355560 FHL3Q13643 280 aa19.21■□□□□ 0.67
CLK2-201ENST00000355560 TSSC4Q9Y5U2 329 aaPredicted RBP19.21■□□□□ 0.67
CLK2-201ENST00000355560 A0A0J9YX75 114 aa19.2■□□□□ 0.66
CLK2-201ENST00000355560 CDPF1Q6NVV7 123 aa19.2■□□□□ 0.66
CLK2-201ENST00000355560 DYNLRB2Q8TF09 96 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms