RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
VPS13B-201ENST00000355155 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
VPS13B-201ENST00000355155 TSSC4Q9Y5U2 329 aaPredicted RBP12.91□□□□□ -0.34
VPS13B-201ENST00000355155 LINC00310P59036 64 aa12.91□□□□□ -0.34
VPS13B-201ENST00000355155 KLLNB2CW77 178 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 SPINK4O60575 86 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 GZMBP10144 247 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 HIST1H2BLQ99880 126 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
VPS13B-201ENST00000355155 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 IGKV3D-20A0A0C4DH25 116 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 F2Z2F3 143 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 MED14OSP0DP75 135 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 PROK1P58294 105 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 KLHL30-AS1Q8NEE0 82 aa12.9□□□□□ -0.34
VPS13B-201ENST00000355155 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
VPS13B-201ENST00000355155 SNAI2O43623 268 aa12.89□□□□□ -0.35
VPS13B-201ENST00000355155 SMR3AQ99954 134 aa12.89□□□□□ -0.35
VPS13B-201ENST00000355155 ALKBH7Q9BT30 221 aaPredicted RBP12.89□□□□□ -0.35
VPS13B-201ENST00000355155 DPF1Q92782 380 aa12.89□□□□□ -0.35
VPS13B-201ENST00000355155 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
VPS13B-201ENST00000355155 ARMS2P0C7Q2 107 aa12.89□□□□□ -0.35
VPS13B-201ENST00000355155 C11orf21Q9P2W6 132 aa12.89□□□□□ -0.35
VPS13B-201ENST00000355155 A0A0J9YX75 114 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 AMBPP02760 352 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 CD28P10747 220 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
VPS13B-201ENST00000355155 PRR9Q5T870 116 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 FER1L6-AS1Q8NA97 138 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 DLX4Q92988 240 aaPredicted RBP12.88□□□□□ -0.35
VPS13B-201ENST00000355155 LYZL1Q6UWQ5 148 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 BORCS7Q96B45 105 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 U3KQK5 164 aa12.88□□□□□ -0.35
VPS13B-201ENST00000355155 FLNAP21333 2647 aaKnown RBP12.87□□□□□ -0.35
VPS13B-201ENST00000355155 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
VPS13B-201ENST00000355155 OR5AL1P0C617 328 aa12.87□□□□□ -0.35
VPS13B-201ENST00000355155 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
VPS13B-201ENST00000355155 RPL11P62913 178 aaKnown RBP12.87□□□□□ -0.35
VPS13B-201ENST00000355155 PAFAH1B2P68402 229 aa12.87□□□□□ -0.35
VPS13B-201ENST00000355155 FOXI2Q6ZQN5 318 aa12.87□□□□□ -0.35
VPS13B-201ENST00000355155 CLUHP3Q96NS8 147 aa12.87□□□□□ -0.35
VPS13B-201ENST00000355155 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
VPS13B-201ENST00000355155 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
VPS13B-201ENST00000355155 ADARB2-AS1A8MUL3 147 aa12.86□□□□□ -0.35
VPS13B-201ENST00000355155 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
VPS13B-201ENST00000355155 S100A2P29034 98 aa12.86□□□□□ -0.35
VPS13B-201ENST00000355155 C18orf32Q8TCD1 76 aa12.86□□□□□ -0.35
VPS13B-201ENST00000355155 ITPR2Q14571 2701 aa12.85□□□□□ -0.35
VPS13B-201ENST00000355155 LEPP41159 167 aa12.85□□□□□ -0.35
VPS13B-201ENST00000355155 AKR1D1P51857 326 aa12.85□□□□□ -0.35
VPS13B-201ENST00000355155 RAB4BP61018 213 aa12.85□□□□□ -0.35
VPS13B-201ENST00000355155 DEFB114Q30KQ6 69 aa12.85□□□□□ -0.35
VPS13B-201ENST00000355155 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
VPS13B-201ENST00000355155 SRIP30626 198 aa12.85□□□□□ -0.35
VPS13B-201ENST00000355155 CAMPP49913 170 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 TMEM256Q8N2U0 113 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 CCL24O00175 119 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 SCRT2Q9NQ03 307 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 ORM1P02763 201 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 CACNG7P62955 275 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 CITED2Q99967 270 aaPredicted RBP12.84□□□□□ -0.35
VPS13B-201ENST00000355155 TMEM191AQ9H0A3 160 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 RNF114Q9Y508 228 aa12.84□□□□□ -0.35
VPS13B-201ENST00000355155 A0A1B0GUS0 222 aa12.83□□□□□ -0.36
VPS13B-201ENST00000355155 NUPR1O60356 82 aa12.83□□□□□ -0.36
VPS13B-201ENST00000355155 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.36
VPS13B-201ENST00000355155 TCF21O43680 179 aa12.83□□□□□ -0.36
VPS13B-201ENST00000355155 GPX1P07203 203 aa12.83□□□□□ -0.36
VPS13B-201ENST00000355155 ZNF705DP0CH99 300 aaPredicted RBP12.83□□□□□ -0.36
VPS13B-201ENST00000355155 ZNF705BP0CI00 300 aaPredicted RBP12.83□□□□□ -0.36
VPS13B-201ENST00000355155 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.36
VPS13B-201ENST00000355155 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 OR2K2Q8NGT1 345 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 F6UB75 175 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 SERF1AO75920 110 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 KIAA1644Q3SXP7 199 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 TDRG1Q3Y452 100 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 KCNS1Q96KK3 526 aa12.82□□□□□ -0.36
VPS13B-201ENST00000355155 CRLF1O75462 422 aa12.81□□□□□ -0.36
VPS13B-201ENST00000355155 FABP4P15090 132 aa12.81□□□□□ -0.36
VPS13B-201ENST00000355155 PSMG4Q5JS54 123 aa12.81□□□□□ -0.36
VPS13B-201ENST00000355155 NXPH4O95158 308 aa12.81□□□□□ -0.36
VPS13B-201ENST00000355155 NDUFA11Q86Y39 141 aa12.81□□□□□ -0.36
VPS13B-201ENST00000355155 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
VPS13B-201ENST00000355155 C12orf57Q99622 126 aa12.81□□□□□ -0.36
VPS13B-201ENST00000355155 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
VPS13B-201ENST00000355155 ZNF688P0C7X2 276 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 EBLN2Q6P2I7 272 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 ZNF256Q9Y2P7 627 aaPredicted RBP12.8□□□□□ -0.36
VPS13B-201ENST00000355155 JOSD1Q15040 202 aaPredicted RBP12.8□□□□□ -0.36
VPS13B-201ENST00000355155 TMSB15BA0A087X1C1 80 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 DEFB1P60022 68 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
VPS13B-201ENST00000355155 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
VPS13B-201ENST00000355155 INAFM1C9JVW0 142 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms