RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 LGALS9BQ3B8N2 356 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 TMEM155Q4W5P6 130 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 LGALS9CQ6DKI2 356 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 Q8NA96 180 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 A0A096LNJ9 63 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 TRAV8-2A0A0B4J237 113 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 SNCGO76070 127 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 SCGB1C2P0DMR2 95 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 MEIG1Q5JSS6 88 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.37□□□□□ -1.23
SMG6-202ENST00000354901 NDUFS7O75251 213 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 IL4P05112 153 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 NCOR2Q9Y618 2525 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 TRAV40A0A0B4J280 105 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 SHISA9B4DS77 424 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 GRNP28799 593 aaKnown RBP7.37□□□□□ -1.23
SMG6-202ENST00000354901 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 RPEQ96AT9 228 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 KLK15Q9H2R5 256 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 Q9H3A6 140 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 ONECUT1Q9UBC0 465 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 MRGPRG-AS1Q2M3A8 158 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 KLF17Q5JT82 389 aaPredicted RBP7.37□□□□□ -1.23
SMG6-202ENST00000354901 Q6AWC8 147 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 MAPKAPK5-AS1Q8N8E1 139 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 ZNF502Q8TBZ5 544 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 SIGLEC9Q9Y336 463 aa7.37□□□□□ -1.23
SMG6-202ENST00000354901 LINC01549A6NIU2 74 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 LEPP41159 167 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 DLX6P56179 175 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 PPP1R27Q86WC6 154 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 PHLDA1Q8WV24 401 aaPredicted RBP7.36□□□□□ -1.23
SMG6-202ENST00000354901 SPTBN4Q9H254 2564 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 IGHV1-3A0A0C4DH29 117 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 FSTL3O95633 263 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 THAP8Q8NA92 274 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 TMEM8BA6NDV4 472 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 NPYP01303 97 aa7.36□□□□□ -1.23
SMG6-202ENST00000354901 FABP5P3A8MUU1 101 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 IGKCP01834 107 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 HES1Q14469 280 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 LINC00311Q8N616 119 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 C17orf77Q96MU5 243 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 PIMREGQ9BSJ6 248 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 CHD8Q9HCK8 2581 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 CD3EP07766 207 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 TWIST1Q15672 202 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 SCGB1D4Q6XE38 83 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 ORMDL3Q8N138 153 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 AJUBAQ96IF1 538 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 C7orf69Q9H7B7 122 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 HIGD1AQ9Y241 93 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 TNFRSF13BO14836 293 aaPredicted RBP7.35□□□□□ -1.23
SMG6-202ENST00000354901 EMP1P54849 157 aa7.35□□□□□ -1.23
SMG6-202ENST00000354901 DLX4Q92988 240 aaPredicted RBP7.35□□□□□ -1.23
SMG6-202ENST00000354901 BUB1B-PAK6H3BSN5 160 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 TCRAP04437 139 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 SMCPP49901 116 aaPredicted RBP7.34□□□□□ -1.23
SMG6-202ENST00000354901 C5orf47Q569G3 176 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 DEFB104AQ8WTQ1 72 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 RASL11BQ9BPW5 248 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 PRO0461Q9UI25 63 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 TIMM23O14925 209 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
SMG6-202ENST00000354901 HLA-DRB4P13762 266 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 GP9P14770 177 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 LYZL1Q6UWQ5 148 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 TRGV9Q99603 122 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 VPREB3Q9UKI3 123 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 HLA-DRB4X5D2U9 266 aa7.34□□□□□ -1.23
SMG6-202ENST00000354901 IGHV3OR16-8A0A075B7F1 116 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 TRAV4A0A0B4J268 109 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
SMG6-202ENST00000354901 MAP1AP78559 2803 aaPredicted RBP7.33□□□□□ -1.24
SMG6-202ENST00000354901 INS-IGF2F8WCM5 200 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 HAX1O00165 279 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 IGHV3-23P01764 117 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 MYCNOSP40205 109 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 C8orf46Q8TAG6 207 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 SLC25A39Q9BZJ4 359 aaPredicted RBP7.33□□□□□ -1.24
SMG6-202ENST00000354901 MAP1LC3AQ9H492 121 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 MRPL35Q9NZE8 188 aaKnown RBP7.33□□□□□ -1.24
SMG6-202ENST00000354901 IGHV3-35A0A0C4DH35 117 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 TEX22C9J3V5 150 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 M0R3E3 92 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 GAS8-AS1O95177 125 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 IGLV1-47P01700 117 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
SMG6-202ENST00000354901 Q86TA4 180 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 PPDPFLQ8WWR9 84 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 RAX2Q96IS3 184 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 KAAG1Q9UBP8 84 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 SPG11Q96JI7 2443 aa7.33□□□□□ -1.24
SMG6-202ENST00000354901 CRLF1O75462 422 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 IFITM1P13164 125 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 MRPL51Q4U2R6 128 aaKnown RBP7.32□□□□□ -1.24
SMG6-202ENST00000354901 Q6ZQT7 251 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms